ENSDARG00000010149


Danio rerio

Features
Gene ID: ENSDARG00000010149
  
Biological name :atp5fa1
  
Synonyms : atp5fa1 / ATP synthase F1 subunit alpha
  
Possible biological names infered from orthology : Atp5a1 / ATP5F1A / ATP synthase subunit alpha, mitochondrial / P25705 / Q03265
  
Species: Danio rerio
  
Chr. number: 21
Strand: 1
Band:
Gene start: 5080789
Gene end: 5092539
  
Corresponding Affymetrix probe sets: Dr.20576.2.S1_a_at (Zebrafish Array)   NM_001077355_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000027947
NCBI entrez gene - 553755     See in Manteia.
RefSeq - NM_001077355
RefSeq Peptide - NP_001070823
swissprot - Q08BA1
ZFIN ID - ZDB-GENE-060201-1
Ensembl - ENSDARG00000010149
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000043758Gallus gallus
 ENSGALG00000037880Gallus gallus
 P25705ENSG00000152234Homo sapiens
 Atp5a1ENSMUSG00000025428Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000194  ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain
 IPR000793  ATP synthase, alpha subunit, C-terminal
 IPR004100  ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain
 IPR005294  ATP synthase, F1 complex, alpha subunit
 IPR020003  ATPase, alpha/beta subunit, nucleotide-binding domain, active site
 IPR023366  ATP synthase subunit alpha, N-terminal domain-like superfamily
 IPR027417  P-loop containing nucleoside triphosphate hydrolase
 IPR033732  ATP synthase, F1 complex, alpha subunit nucleotide-binding domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006754 ATP biosynthetic process IEA
 biological_processGO:0006811 ion transport IEA
 biological_processGO:0015986 ATP synthesis coupled proton transport IEA
 biological_processGO:0046034 ATP metabolic process IEA
 biological_processGO:0099132 ATP hydrolysis coupled cation transmembrane transport IEA
 cellular_componentGO:0045261 proton-transporting ATP synthase complex, catalytic core F(1) IEA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0032559 adenyl ribonucleotide binding IEA
 molecular_functionGO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEA


Pathways (from Reactome)
Pathway description
Formation of ATP by chemiosmotic coupling
Cristae formation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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