ENSG00000152234


Homo sapiens

Features
Gene ID: ENSG00000152234
  
Biological name :ATP5F1A
  
Synonyms : ATP5F1A / ATP synthase F1 subunit alpha / P25705
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 18
Strand: -1
Band: q21.1
Gene start: 46080248
Gene end: 46104334
  
Corresponding Affymetrix probe sets: 1569891_at (Human Genome U133 Plus 2.0 Array)   213738_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000468458
Ensembl peptide - ENSP00000467983
Ensembl peptide - ENSP00000468618
Ensembl peptide - ENSP00000282050
Ensembl peptide - ENSP00000381736
Ensembl peptide - ENSP00000465259
Ensembl peptide - ENSP00000465477
Ensembl peptide - ENSP00000465497
Ensembl peptide - ENSP00000465805
Ensembl peptide - ENSP00000466275
Ensembl peptide - ENSP00000466309
Ensembl peptide - ENSP00000466975
Ensembl peptide - ENSP00000467037
Ensembl peptide - ENSP00000467830
NCBI entrez gene - 498     See in Manteia.
OMIM - 164360
RefSeq - XM_017025789
RefSeq - NM_001001935
RefSeq - NM_001001937
RefSeq - NM_001257334
RefSeq - NM_001257335
RefSeq - NM_004046
RefSeq Peptide - NP_004037
RefSeq Peptide - NP_001244264
RefSeq Peptide - NP_001001935
RefSeq Peptide - NP_001001937
RefSeq Peptide - NP_001244263
swissprot - V9HW26
swissprot - A0A0A0MTS3
swissprot - K7EJP1
swissprot - K7EK77
swissprot - K7EKV9
swissprot - K7EM08
swissprot - K7EQH4
swissprot - K7ENJ4
swissprot - K7EQU6
swissprot - K7ERX7
swissprot - K7ESA0
swissprot - P25705
Ensembl - ENSG00000152234
  
Related genetic diseases (OMIM): 615228 - ?Mitochondrial complex (ATP synthase) deficiency, nuclear type 4, 615228
  616045 - ?Combined oxidative phosphorylation deficiency 22, 616045
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 atp5fa1ENSDARG00000010149Danio rerio
 ENSGALG00000043758Gallus gallus
 ENSGALG00000037880Gallus gallus
 Atp5a1ENSMUSG00000025428Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000194  ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain
 IPR000793  ATP synthase, alpha subunit, C-terminal
 IPR004100  ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain
 IPR005294  ATP synthase, F1 complex, alpha subunit
 IPR020003  ATPase, alpha/beta subunit, nucleotide-binding domain, active site
 IPR023366  ATP synthase subunit alpha, N-terminal domain-like superfamily
 IPR027417  P-loop containing nucleoside triphosphate hydrolase
 IPR033732  ATP synthase, F1 complex, alpha subunit nucleotide-binding domain
 IPR036121  ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001937 negative regulation of endothelial cell proliferation IMP
 biological_processGO:0006629 lipid metabolic process ISS
 biological_processGO:0006754 ATP biosynthetic process IMP
 biological_processGO:0006811 ion transport IEA
 biological_processGO:0015986 ATP synthesis coupled proton transport IEA
 biological_processGO:0042407 cristae formation TAS
 biological_processGO:0042776 mitochondrial ATP synthesis coupled proton transport TAS
 biological_processGO:0043536 positive regulation of blood vessel endothelial cell migration IGI
 biological_processGO:0046034 ATP metabolic process IEA
 biological_processGO:0099132 ATP hydrolysis coupled cation transmembrane transport IEA
 cellular_componentGO:0005739 mitochondrion NAS
 cellular_componentGO:0005743 mitochondrial inner membrane IEA
 cellular_componentGO:0005753 mitochondrial proton-transporting ATP synthase complex IDA
 cellular_componentGO:0005759 mitochondrial matrix TAS
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0008180 COP9 signalosome IDA
 cellular_componentGO:0016020 membrane IDA
 cellular_componentGO:0043209 myelin sheath IEA
 cellular_componentGO:0045259 proton-transporting ATP synthase complex IDA
 cellular_componentGO:0045261 proton-transporting ATP synthase complex, catalytic core F(1) IEA
 cellular_componentGO:0070062 extracellular exosome HDA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0003723 RNA binding HDA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0005524 ATP binding ISS
 molecular_functionGO:0016887 ATPase activity IDA
 molecular_functionGO:0022857 transmembrane transporter activity IC
 molecular_functionGO:0032559 adenyl ribonucleotide binding IEA
 molecular_functionGO:0042288 MHC class I protein binding IDA
 molecular_functionGO:0043532 angiostatin binding IPI
 molecular_functionGO:0046933 proton-transporting ATP synthase activity, rotational mechanism ISS


Pathways (from Reactome)
Pathway description
Mitochondrial protein import
Formation of ATP by chemiosmotic coupling
Cristae formation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000252 Microcephaly "Microcephaly is a neurodevelopmental disorder in which the circumference of the head is more than two standard deviations smaller than the age- and gender-dependent norm." [HPO:curators]
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 HP:0000639 Nystagmus "Rhythmic, involuntary oscillations of one or both eyes related to abnormality in fixation, conjugate gaze, or vestibular mechanisms." [HPO:curators]
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 HP:0000737 Irritability 
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 HP:0001250 Seizures "Seizures are an intermittent `abnormality of the central nervous system` (FMA:HP:0002011) due to a sudden, excessive, disorderly discharge of cerebral neurons and characterized clinically by some combination of disturbance of sensation, loss of consciousness, impairment of psychic function, or convulsive movements." [HPO:probinson]
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 HP:0001290 Generalized hypotonia "Generalized muscular hypotonia (abnormally low muscle tone)." [HPO:curators]
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 HP:0001298 Encephalopathy 
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 HP:0001321 Cerebellar hypoplasia 
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 HP:0001508 Failure to thrive 
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 HP:0001511 Intrauterine growth retardation 
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 HP:0001635 Congestive heart failure "The presence of an abnormality of cardiac function that is responsible for the failure of the heart to pump blood at a rate that is commensurate with the needs of the tissues or a state in which abnormally elevated filling pressures are required for the heart to do so. Heart failure is frequently related to a defect in myocardial contraction." [HPO:curators]
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 HP:0002089 Pulmonary hypoplasia 
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 HP:0002092 Pulmonary hypertension 
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 HP:0002104 Apnea "Lack of breathing with no movement of the respiratory muscles and no exchange of air in the lungs. This term refers to a disposition to have recurrent episodes of apnea rather than to a single event." [HPO:curators]
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 HP:0003348 Hyperalaninemia 
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 HP:0003577 Onset at birth 
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 HP:0025430 High-pitched cry "A type of crying in an abnormally high-pitched voice." []
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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