ENSDARG00000010301


Danio rerio

Features
Gene ID: ENSDARG00000010301
  
Biological name :b4galt6
  
Synonyms : b4galt6 / UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6
  
Possible biological names infered from orthology : beta-1,4-galactosyltransferase 6 / Beta-1,4-galactosyltransferase 6 Glucosylceramide beta-1,4-galactosyltransferase / Q9UBX8 / Q9WVK5
  
Species: Danio rerio
  
Chr. number: 20
Strand: -1
Band:
Gene start: 6163932
Gene end: 6196989
  
Corresponding Affymetrix probe sets: Dr.20808.1.S1_at (Zebrafish Array)   Dr.25680.1.A1_at (Zebrafish Array)   NM_200938_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000018673
Ensembl peptide - ENSDARP00000114916
NCBI entrez gene - 393912     See in Manteia.
RefSeq - NM_200938
RefSeq Peptide - NP_957232
swissprot - F1QGG1
swissprot - A0A0R4IM48
swissprot - F1QHW8
ZFIN ID - ZDB-GENE-040426-789
Ensembl - ENSDARG00000010301
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 B4GALT6ENSGALG00000015151Gallus gallus
 Q9UBX8ENSG00000118276Homo sapiens
 Q9WVK5ENSMUSG00000056124Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
b4galt5 / UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5ENSDARG0000003781568
b4galt3 / UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 3 / O60512* / Q91YY2* / beta-1,4-galactosyltransferase 3* / Beta-1,4-galactosyltransferase 3 N-acetyllactosamine sy...ENSDARG0000006232934
b4galt1l / DP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1, likeENSDARG0000010440434
b4galt2 / UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 2 / O60909* / Q9Z2Y2* / beta-1,4-galactosyltransferase 2* / Beta-1,4-galactosyltransferase 2 Lactose synthase A pro...ENSDARG0000007799433
si:dkey-199f5.8ENSDARG0000001885333
b4galt4 / UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 4 / O60513* / Q9JJ04* / beta-1,4-galactosyltransferase 4* / Beta-1,4-galactosyltransferase 4 N-acetyllactosamine sy...ENSDARG0000010404231
b4galt1 / UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1 / P15291* / P15535* / beta-1,4-galactosyltransferase 1* / Beta-1,4-galactosyltransferase 1 Lactose synthase A pro...ENSDARG0000000263426
b4galt7 / xylosylprotein beta 1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I) / Q8R087* / Q9UBV7* / beta-1,4-galactosyltransferase 7* / Beta-1,4-galactosyltransferase 7 X...ENSDARG0000002189923


Protein motifs (from Interpro)
Interpro ID Name
 IPR003859  Beta-1,4-galactosyltransferase
 IPR027791  Galactosyltransferase, C-terminal
 IPR027995  Galactosyltransferase, N-terminal
 IPR029044  Nucleotide-diphospho-sugar transferases


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0005975 carbohydrate metabolic process IEA
 biological_processGO:0006687 glycosphingolipid metabolic process IMP
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0008489 UDP-galactose:glucosylceramide beta-1,4-galactosyltransferase activity IMP
 molecular_functionGO:0016757 transferase activity, transferring glycosyl groups IEA


Pathways (from Reactome)
Pathway description
Keratan sulfate biosynthesis
N-Glycan antennae elongation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr