ENSG00000118276


Homo sapiens

Features
Gene ID: ENSG00000118276
  
Biological name :B4GALT6
  
Synonyms : B4GALT6 / beta-1,4-galactosyltransferase 6 / Q9UBX8
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 18
Strand: -1
Band: q12.1
Gene start: 31622247
Gene end: 31685836
  
Corresponding Affymetrix probe sets: 206232_s_at (Human Genome U133 Plus 2.0 Array)   206233_at (Human Genome U133 Plus 2.0 Array)   231342_at (Human Genome U133 Plus 2.0 Array)   235333_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000237019
Ensembl peptide - ENSP00000306459
Ensembl peptide - ENSP00000372613
Ensembl peptide - ENSP00000463961
NCBI entrez gene - 9331     See in Manteia.
OMIM - 604017
RefSeq - XM_017026092
RefSeq - XM_006722579
RefSeq - XM_017026088
RefSeq - XM_017026089
RefSeq - XM_017026090
RefSeq - XM_017026091
RefSeq - NM_004775
RefSeq - XM_005258387
RefSeq - XM_006722578
RefSeq Peptide - NP_001317499
RefSeq Peptide - NP_004766
swissprot - J3QQY9
swissprot - G3XA83
swissprot - Q9UBX8
Ensembl - ENSG00000118276
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 b4galt6ENSDARG00000010301Danio rerio
 B4GALT6ENSGALG00000015151Gallus gallus
 Q9WVK5ENSMUSG00000056124Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
O43286 / B4GALT5 / beta-1,4-galactosyltransferase 5ENSG0000015847072
O60512 / B4GALT3 / beta-1,4-galactosyltransferase 3ENSG0000015885035
P15291 / B4GALT1 / beta-1,4-galactosyltransferase 1ENSG0000008606233
O60909 / B4GALT2 / beta-1,4-galactosyltransferase 2ENSG0000011741132
O60513 / B4GALT4 / beta-1,4-galactosyltransferase 4ENSG0000012157831
Q9UBV7 / B4GALT7 / beta-1,4-galactosyltransferase 7ENSG0000002784724


Protein motifs (from Interpro)
Interpro ID Name
 IPR003859  Beta-1,4-galactosyltransferase
 IPR027791  Galactosyltransferase, C-terminal
 IPR027995  Galactosyltransferase, N-terminal
 IPR029044  Nucleotide-diphospho-sugar transferases


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001572 lactosylceramide biosynthetic process IDA
 biological_processGO:0005975 carbohydrate metabolic process IEA
 biological_processGO:0006486 protein glycosylation IEA
 biological_processGO:0018146 keratan sulfate biosynthetic process TAS
 cellular_componentGO:0000139 Golgi membrane TAS
 cellular_componentGO:0005794 Golgi apparatus IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0032580 Golgi cisterna membrane IEA
 molecular_functionGO:0003831 beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase activity TAS
 molecular_functionGO:0008378 galactosyltransferase activity IDA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0016757 transferase activity, transferring glycosyl groups IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
Keratan sulfate biosynthesis
O-linked glycosylation of mucins
N-Glycan antennae elongation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000118276 Q9UBX8 / B4GALT6 / beta-1,4-galactosyltransferase 6  / complex






 

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