ENSMUSG00000056124


Mus musculus

Features
Gene ID: ENSMUSG00000056124
  
Biological name :B4galt6
  
Synonyms : B4galt6 / Beta-1,4-galactosyltransferase 6 Glucosylceramide beta-1,4-galactosyltransferase / Q9WVK5
  
Possible biological names infered from orthology : beta-1,4-galactosyltransferase 6 / Q9UBX8
  
Species: Mus musculus
  
Chr. number: 18
Strand: -1
Band: A2
Gene start: 20684599
Gene end: 20746404
  
Corresponding Affymetrix probe sets: 10457733 (MoGene1.0st)   1423228_at (Mouse Genome 430 2.0 Array)   1435758_at (Mouse Genome 430 2.0 Array)   1450913_at (Mouse Genome 430 2.0 Array)   1460329_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000066515
NCBI entrez gene - 56386     See in Manteia.
MGI - MGI:1928380
RefSeq - NM_019737
RefSeq Peptide - NP_062711
swissprot - Q3UUA9
swissprot - Q9WVK5
Ensembl - ENSMUSG00000056124
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 b4galt6ENSDARG00000010301Danio rerio
 B4GALT6ENSGALG00000015151Gallus gallus
 Q9UBX8ENSG00000118276Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q9JMK0 / B4galt5 / Beta-1,4-galactosyltransferase 5 / O43286*ENSMUSG0000001792971
Q91YY2 / B4galt3 / Beta-1,4-galactosyltransferase 3 N-acetyllactosamine synthase Beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase Beta-N-acetylglucosaminyl-glycolipid bet...ENSMUSG0000005242332
Q9Z2Y2 / B4galt2 / Beta-1,4-galactosyltransferase 2 Lactose synthase A protein N-acetyllactosamine synthase Beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase Beta-N-acetyl...ENSMUSG0000002854132
Q9JJ04 / B4galt4 / Beta-1,4-galactosyltransferase 4 N-acetyllactosamine synthase Lactotriaosylceramide beta-1,4-galactosyltransferase / O60513* / beta-1,4-galactosyltransferase 4*ENSMUSG0000002279332
P15535 / B4galt1 / Beta-1,4-galactosyltransferase 1 Lactose synthase A protein N-acetyllactosamine synthase Beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase Beta-N-acetyl...ENSMUSG0000002841332
Q8R087 / B4galt7 / Beta-1,4-galactosyltransferase 7 Xylosylprotein 4-beta-galactosyltransferase / Q9UBV7* / beta-1,4-galactosyltransferase 7*ENSMUSG0000002150423


Protein motifs (from Interpro)
Interpro ID Name
 IPR003859  Beta-1,4-galactosyltransferase
 IPR027791  Galactosyltransferase, C-terminal
 IPR027995  Galactosyltransferase, N-terminal
 IPR029044  Nucleotide-diphospho-sugar transferases


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001572 lactosylceramide biosynthetic process ISO
 biological_processGO:0005975 carbohydrate metabolic process IEA
 biological_processGO:0006486 protein glycosylation IEA
 biological_processGO:0030148 sphingolipid biosynthetic process TAS
 cellular_componentGO:0005575 cellular_component ND
 cellular_componentGO:0005794 Golgi apparatus IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0032580 Golgi cisterna membrane IEA
 molecular_functionGO:0008378 galactosyltransferase activity IEA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0016757 transferase activity, transferring glycosyl groups IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
Keratan sulfate biosynthesis
O-linked glycosylation of mucins
N-Glycan antennae elongation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0002169 no phenotype detected "normal, viable and fertile appearance and behavior; indistinguishable from controls" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
Show

Allelic Composition: Casp9tm1Flv/Casp9tm1Flv
Genetic Background: B6.129S1-Casp9tm1Flv

 MP:0005621 abnormal cell physiology "aberration in the vital processes of the cell " [Stedman s Medical Dictionary:ISBN 0-683-40008-8, hdene:Howard Dene , Mouse Genome Informatics Curator]
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Allelic Composition: Ano6tm1Avor/Ano6tm1Avor
Genetic Background: involves: 129

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSMUSG00000056124 Q9WVK5 / B4galt6 / Beta-1,4-galactosyltransferase 6 Glucosylceramide beta-1,4-galactosyltransferase / Q9UBX8* / beta-1,4-galactosyltransferase 6*  / complex






 

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