ENSDARG00000010862


Danio rerio

Features
Gene ID: ENSDARG00000010862
  
Biological name :amt
  
Synonyms : aminomethyltransferase / amt
  
Possible biological names infered from orthology : Aminomethyltransferase, mitochondrial / P48728 / Q8CFA2
  
Species: Danio rerio
  
Chr. number: 8
Strand: 1
Band:
Gene start: 26396552
Gene end: 26408670
  
Corresponding Affymetrix probe sets: Dr.7554.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000081585
NCBI entrez gene - 450000     See in Manteia.
RefSeq - NM_001006021
RefSeq Peptide - NP_001006021
swissprot - A9C3Q7
ZFIN ID - ZDB-GENE-041010-114
Ensembl - ENSDARG00000010862
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 AMTENSGALG00000025844Gallus gallus
 AMTENSG00000145020Homo sapiens
 AmtENSMUSG00000032607Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
sardh / sarcosine dehydrogenase / Q99LB7* / Q9UL12*ENSDARG0000005810222
dmgdh / dimethylglycine dehydrogenase / Q9UI17*ENSDARG0000002570322
PDPR / si:cabz01113374.3 / Q8NCN5* / pyruvate dehydrogenase phosphatase regulatory subunit*ENSDARG0000010328820


Protein motifs (from Interpro)
Interpro ID Name
 IPR006222  Aminomethyltransferase, folate-binding domain
 IPR013977  Glycine cleavage T-protein, C-terminal barrel domain
 IPR029043  Glycine cleavage T-protein/YgfZ, C-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006546 glycine catabolic process IEA
 biological_processGO:0032259 methylation IEA
 cellular_componentGO:0005739 mitochondrion IEA
 molecular_functionGO:0004047 aminomethyltransferase activity IEA
 molecular_functionGO:0008483 transaminase activity IEA
 molecular_functionGO:0016740 transferase activity IEA


Pathways (from Reactome)
Pathway description
Glycine degradation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000105187 gcshb / glycine cleavage system protein H (aminomethyl carrier), b / GCSH* / P23434* / Q91WK5* / AC092718.3* / AC092718.8* / glycine cleavage system protein H* / Glycine cleavage system H p...  / reaction






 

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contact: otassy@igbmc.fr