ENSDARG00000010878


Danio rerio

Features
Gene ID: ENSDARG00000010878
  
Biological name :cdkn1ca
  
Synonyms : cdkn1ca / cyclin-dependent kinase inhibitor 1Ca
  
Possible biological names infered from orthology : CDKN1C / cyclin dependent kinase inhibitor 1C / Mus musculus cyclin-dependent kinase inhibitor 1C (P57) (Cdkn1c), mRNA. / P49918 / P49919
  
Species: Danio rerio
  
Chr. number: 7
Strand: -1
Band:
Gene start: 48663031
Gene end: 48667056
  
Corresponding Affymetrix probe sets: Dr.3502.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000009882
Ensembl peptide - ENSDARP00000146710
NCBI entrez gene - 399483     See in Manteia.
swissprot - Q6IQT7
ZFIN ID - ZDB-GENE-040123-1
Ensembl - ENSDARG00000010878
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CDKN1CENSG00000129757Homo sapiens
 Cdkn1cENSMUSG00000037664Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
cdkn1cb / cyclin-dependent kinase inhibitor 1Cb / P49919* / P49918* / CDKN1C* / cyclin dependent kinase inhibitor 1C* / Mus musculus cyclin-dependent kinase inhibitor 1C (P57) (Cdkn1c), mRNA.*ENSDARG0000010490327
cdkn1bb / cyclin-dependent kinase inhibitor 1Bb / CDKN1B* / P46414* / P46527* / cyclin dependent kinase inhibitor 1B*ENSDARG0000005427121
cdkn1ba / cyclin-dependent kinase inhibitor 1Ba / CDKN1B* / P46414* / P46527* / cyclin dependent kinase inhibitor 1B*ENSDARG0000002901820
cdkn1a / cyclin-dependent kinase inhibitor 1A / P38936* / P39689* / Cyclin-dependent kinase inhibitor 1 *ENSDARG0000007655417


Protein motifs (from Interpro)
Interpro ID Name
 IPR003175  Cyclin-dependent kinase inhibitor
 IPR029842  Cyclin-dependent kinase inhibitor 1C


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001708 cell fate specification IMP
 biological_processGO:0007050 cell cycle arrest IEA
 biological_processGO:0010001 glial cell differentiation IMP
 biological_processGO:0016310 phosphorylation IEA
 biological_processGO:0045930 negative regulation of mitotic cell cycle IMP
 biological_processGO:0071901 negative regulation of protein serine/threonine kinase activity IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0004861 cyclin-dependent protein serine/threonine kinase inhibitor activity IEA
 molecular_functionGO:0016301 kinase activity IEA


Pathways (from Reactome)
Pathway description
Cyclin D associated events in G1


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000003 adaxial cell adaxial cell decreased amount , abnormal
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 ZFA:0001652 head muscle head muscle hypoplastic , abnormal
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 ZFA:0009117 fast muscle cell fast muscle cell decreased amount , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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