ENSDARG00000011570


Danio rerio

Features
Gene ID: ENSDARG00000011570
  
Biological name :pou6f1
  
Synonyms : P31367 / pou6f1 / POU class 6 homeobox 1
  
Possible biological names infered from orthology : POU domain, class 6, transcription factor 1 / Q07916
  
Species: Danio rerio
  
Chr. number: 23
Strand: -1
Band:
Gene start: 33681677
Gene end: 33710029
  
Corresponding Affymetrix probe sets: Dr.14.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000121918
Ensembl peptide - ENSDARP00000111302
Ensembl peptide - ENSDARP00000151917
NCBI entrez gene - 30334     See in Manteia.
swissprot - E9QE86
swissprot - P31367
ZFIN ID - ZDB-GENE-980526-530
Ensembl - ENSDARG00000011570
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 POU6F1ENSG00000184271Homo sapiens
 Pou6f1ENSMUSG00000009739Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
pou6f2 / POU class 6 homeobox 2 / P78424* / POU domain, class 6, transcription factor 2*ENSDARG0000008636238


Protein motifs (from Interpro)
Interpro ID Name
 IPR000327  POU-specific domain
 IPR001356  Homeobox domain
 IPR009057  Homeobox-like domain superfamily
 IPR010982  Lambda repressor-like, DNA-binding domain superfamily
 IPR013847  POU domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr