ENSG00000184271


Homo sapiens

Features
Gene ID: ENSG00000184271
  
Biological name :POU6F1
  
Synonyms : POU6F1 / POU class 6 homeobox 1
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 12
Strand: -1
Band: q13.13
Gene start: 51186936
Gene end: 51217708
  
Corresponding Affymetrix probe sets: 205878_at (Human Genome U133 Plus 2.0 Array)   216330_s_at (Human Genome U133 Plus 2.0 Array)   216332_at (Human Genome U133 Plus 2.0 Array)   229809_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000330190
Ensembl peptide - ENSP00000490559
Ensembl peptide - ENSP00000489978
Ensembl peptide - ENSP00000448389
NCBI entrez gene - 5463     See in Manteia.
RefSeq - XM_017019530
RefSeq - XM_017019525
RefSeq - XM_017019526
RefSeq - XM_017019527
RefSeq - XM_017019528
RefSeq - XM_017019529
RefSeq - XM_017019507
RefSeq - XM_017019508
RefSeq - XM_017019509
RefSeq - XM_017019510
RefSeq - XM_017019511
RefSeq - XM_017019512
RefSeq - XM_017019513
RefSeq - XM_017019514
RefSeq - XM_017019515
RefSeq - XM_017019516
RefSeq - XM_017019517
RefSeq - XM_017019518
RefSeq - XM_017019519
RefSeq - XM_017019520
RefSeq - XM_017019521
RefSeq - XM_017019522
RefSeq - XM_017019523
RefSeq - XM_017019524
RefSeq Peptide - NP_001317351
swissprot - A0A1C7CYY7
swissprot - A0A1C7CYV8
swissprot - A0A1B0GVK9
swissprot - A0A1B0GU61
Ensembl - ENSG00000184271
  

This gene has been taged as a transcription factor by TFT
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 P31367ENSDARG00000011570Danio rerio
 Pou6f1ENSMUSG00000009739Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
P78424 / POU6F2 / POU class 6 homeobox 2ENSG0000010653640


Protein motifs (from Interpro)
Interpro ID Name
 IPR000327  POU-specific domain
 IPR001356  Homeobox domain
 IPR009057  Homeobox-like domain superfamily
 IPR010982  Lambda repressor-like, DNA-binding domain superfamily
 IPR013847  POU domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0015629 actin cytoskeleton IDA
 cellular_componentGO:0016604 nuclear body IDA
 molecular_functionGO:0000977 RNA polymerase II regulatory region sequence-specific DNA binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr