ENSDARG00000011837


Danio rerio

Features
Gene ID: ENSDARG00000011837
  
Biological name :zgc:100846
  
Synonyms : zgc:100846
  
Possible biological names infered from orthology : 3110043O21Rik / C9orf72 / chromosome 9 open reading frame 72 / Guanine nucleotide exchange C9orf72 homolog / Q6DFW0 / Q96LT7
  
Species: Danio rerio
  
Chr. number: 13
Strand: 1
Band:
Gene start: 12761707
Gene end: 12778947
  
Corresponding Affymetrix probe sets: Dr.25978.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000005597
NCBI entrez gene - 402895     See in Manteia.
swissprot - Q6TLH8
ZFIN ID - ZDB-GENE-040801-47
Ensembl - ENSDARG00000011837
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 C9orf72ENSGALG00000001864Gallus gallus
 Q96LT7ENSG00000147894Homo sapiens
 Q6DFW0ENSMUSG00000028300Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR027819  Guanine nucleotide exchange C9orf72


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001966 thigmotaxis IMP
 biological_processGO:0006897 endocytosis IBA
 biological_processGO:0006914 autophagy IBA
 biological_processGO:0036268 swimming IMP
 biological_processGO:0036269 swimming behavior IMP
 biological_processGO:0061564 axon development IMP
 biological_processGO:0065009 regulation of molecular function IEA
 cellular_componentGO:0005768 endosome IBA
 cellular_componentGO:0005776 autophagosome IBA
 molecular_functionGO:0005085 guanyl-nucleotide exchange factor activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0001094 whole organism whole organism decreased mobility , abnormal
whole organism dead , abnormal
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 ZFA:0009052 motor neuron motor neuron axon decreased length , abnormal
motor neuron axon branchiness , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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