ENSDARG00000012275


Danio rerio

Features
Gene ID: ENSDARG00000012275
  
Biological name :katnal2
  
Synonyms : katanin p60 subunit A-like 2 / katnal2
  
Possible biological names infered from orthology : katanin catalytic subunit A1 like 2 / Katanin p60 ATPase-containing subunit A-like 2 / Q8IYT4 / Q9D3R6
  
Species: Danio rerio
  
Chr. number: 10
Strand: 1
Band:
Gene start: 14499201
Gene end: 14521190
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000064900
swissprot - F1QSI7
ZFIN ID - ZDB-GENE-051113-156
Ensembl - ENSDARG00000012275
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 KATNAL2ENSGALG00000041882Gallus gallus
 Q8IYT4ENSG00000167216Homo sapiens
 Q9D3R6ENSMUSG00000025420Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
katna1 / Q5RII9 / katanin p60 (ATPase containing) subunit A 1 / O75449* / katanin catalytic subunit A1*ENSDARG0000002182733
katnal1 / katanin p60 subunit A-like 1 / Q9BW62* / katanin catalytic subunit A1 like 1*ENSDARG0000009915632
vps4a / vacuolar protein sorting 4a homolog A (S. cerevisiae) / Q8VEJ9* / Q9UN37* / AC026464.4* / vacuolar protein sorting 4A* / vacuolar protein sorting 4 homolog A*ENSDARG0000003011430
vps4b / vacuolar protein sorting 4b homolog B (S. cerevisiae)ENSDARG0000006917529
si:dkey-185p13.1 / VPS4B* / P46467* / O75351* / vacuolar protein sorting 4B* / vacuolar protein sorting 4 homolog B*ENSDARG000000958373


Protein motifs (from Interpro)
Interpro ID Name
 IPR003593  AAA+ ATPase domain
 IPR003959  ATPase, AAA-type, core
 IPR006594  LIS1 homology motif
 IPR027417  P-loop containing nucleoside triphosphate hydrolase
 IPR027497  Katanin p60 ATPase-containing subunit A-like 2


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005634 nucleus IBA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0016887 ATPase activity IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr