ENSDARG00000095837


Danio rerio

Features
Gene ID: ENSDARG00000095837
  
Biological name :si:dkey-185p13.1
  
Synonyms : si:dkey-185p13.1
  
Possible biological names infered from orthology : O75351 / P46467 / vacuolar protein sorting 4B / vacuolar protein sorting 4 homolog B / VPS4B
  
Species: Danio rerio
  
Chr. number: 2
Strand: -1
Band:
Gene start: 13298051
Gene end: 13333932
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000129221
swissprot - X1WG66
ZFIN ID - ZDB-GENE-110411-125
Ensembl - ENSDARG00000095837
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 VPS4BENSGALG00000012879Gallus gallus
 VPS4BENSG00000119541Homo sapiens
 Vps4bENSMUSG00000009907Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
vps4b / vacuolar protein sorting 4b homolog B (S. cerevisiae)ENSDARG0000006917539
vps4a / vacuolar protein sorting 4a homolog A (S. cerevisiae) / Q8VEJ9* / Q9UN37* / AC026464.4* / vacuolar protein sorting 4A* / vacuolar protein sorting 4 homolog A*ENSDARG0000003011434
katna1 / Q5RII9 / katanin p60 (ATPase containing) subunit A 1 / O75449* / katanin catalytic subunit A1*ENSDARG0000002182723
katnal1 / katanin p60 subunit A-like 1 / Q9BW62* / katanin catalytic subunit A1 like 1*ENSDARG0000009915620
katnal2 / katanin p60 subunit A-like 2 / Q8IYT4* / Q9D3R6* / katanin catalytic subunit A1 like 2* / Katanin p60 ATPase-containing subunit A-like 2 *ENSDARG0000001227515


Protein motifs (from Interpro)
Interpro ID Name
 IPR007330  MIT


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005634 nucleus IBA
 molecular_functionGO:0016887 ATPase activity IBA


Pathways (from Reactome)
Pathway description
Endosomal Sorting Complex Required For Transport (ESCRT)


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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