ENSDARG00000012450


Danio rerio

Features
Gene ID: ENSDARG00000012450
  
Biological name :vmp1
  
Synonyms : vacuole membrane protein 1 / vmp1
  
Possible biological names infered from orthology : Q96GC9 / Q99KU0
  
Species: Danio rerio
  
Chr. number: 15
Strand: 1
Band:
Gene start: 17343319
Gene end: 17373352
  
Corresponding Affymetrix probe sets: Dr.982.1.S1_at (Zebrafish Array)   NM_207060_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000098034
Ensembl peptide - ENSDARP00000004153
NCBI entrez gene - 336789     See in Manteia.
RefSeq - XM_005157413
RefSeq - NM_207060
RefSeq Peptide - NP_996943
swissprot - F1QFE0
swissprot - F1Q6C7
ZFIN ID - ZDB-GENE-030131-8733
Ensembl - ENSDARG00000012450
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 VMP1ENSGALG00000005160Gallus gallus
 VMP1ENSG00000062716Homo sapiens
 Vmp1ENSMUSG00000018171Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
No match


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000123 liver liver color , abnormal
liver fatty , abnormal
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 ZFA:0009111 hepatocyte hepatocyte increased size , abnormal
hepatocyte microvesicle increased amount , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr