ENSG00000062716


Homo sapiens

Features
Gene ID: ENSG00000062716
  
Biological name :VMP1
  
Synonyms : Q96GC9 / vacuole membrane protein 1 / VMP1
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 17
Strand: 1
Band: q23.1
Gene start: 59707192
Gene end: 59842255
  
Corresponding Affymetrix probe sets: 1569003_at (Human Genome U133 Plus 2.0 Array)   220990_s_at (Human Genome U133 Plus 2.0 Array)   224917_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000465911
Ensembl peptide - ENSP00000465947
Ensembl peptide - ENSP00000465972
Ensembl peptide - ENSP00000466198
Ensembl peptide - ENSP00000466413
Ensembl peptide - ENSP00000466511
Ensembl peptide - ENSP00000466579
Ensembl peptide - ENSP00000467093
Ensembl peptide - ENSP00000467350
Ensembl peptide - ENSP00000262291
Ensembl peptide - ENSP00000465397
NCBI entrez gene - 81671     See in Manteia.
OMIM - 611753
RefSeq - NM_030938
RefSeq Peptide - NP_001316323
RefSeq Peptide - NP_112200
swissprot - Q96GC9
swissprot - K7EK01
swissprot - K7EL46
swissprot - K7EL74
swissprot - K7EL93
swissprot - K7ELS2
swissprot - K7EM96
swissprot - K7EMI0
swissprot - K7EMN6
swissprot - K7ENU2
swissprot - K7EPE7
Ensembl - ENSG00000062716
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 vmp1ENSDARG00000012450Danio rerio
 VMP1ENSGALG00000005160Gallus gallus
 Vmp1ENSMUSG00000018171Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR032816  SNARE associated Golgi protein


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006887 exocytosis IBA
 biological_processGO:0006914 autophagy IEA
 biological_processGO:0007029 endoplasmic reticulum organization IBA
 biological_processGO:0007030 Golgi organization IBA
 biological_processGO:0007155 cell adhesion IEA
 biological_processGO:0007566 embryo implantation IEA
 biological_processGO:0034329 cell junction assembly IMP
 biological_processGO:0098609 cell-cell adhesion IMP
 cellular_componentGO:0000407 phagophore assembly site IEA
 cellular_componentGO:0000421 autophagosome membrane IEA
 cellular_componentGO:0005730 nucleolus IDA
 cellular_componentGO:0005773 vacuole IEA
 cellular_componentGO:0005774 vacuolar membrane IEA
 cellular_componentGO:0005783 endoplasmic reticulum IDA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0033116 endoplasmic reticulum-Golgi intermediate compartment membrane IEA
 molecular_functionGO:0005515 protein binding IPI


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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