ENSMUSG00000018171


Mus musculus

Features
Gene ID: ENSMUSG00000018171
  
Biological name :Vmp1
  
Synonyms : Q99KU0 / vacuole membrane protein 1 / Vmp1
  
Possible biological names infered from orthology : Q96GC9
  
Species: Mus musculus
  
Chr. number: 11
Strand: -1
Band: C
Gene start: 86583865
Gene end: 86683836
  
Corresponding Affymetrix probe sets: 10389507 (MoGene1.0st)   1421491_a_at (Mouse Genome 430 2.0 Array)   1423722_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000018315
Ensembl peptide - ENSMUSP00000118302
NCBI entrez gene - 75909     See in Manteia.
MGI - MGI:1923159
RefSeq - XM_006534403
RefSeq - NM_029478
RefSeq - XM_006534402
RefSeq Peptide - NP_001343460
RefSeq Peptide - NP_083754
swissprot - Q5SXR2
swissprot - Q99KU0
Ensembl - ENSMUSG00000018171
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 vmp1ENSDARG00000012450Danio rerio
 VMP1ENSGALG00000005160Gallus gallus
 VMP1ENSG00000062716Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR032816  SNARE associated Golgi protein


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006887 exocytosis IBA
 biological_processGO:0006914 autophagy IDA
 biological_processGO:0007029 endoplasmic reticulum organization IBA
 biological_processGO:0007030 Golgi organization IBA
 biological_processGO:0007155 cell adhesion IEA
 biological_processGO:0007566 embryo implantation IDA
 biological_processGO:0034329 cell junction assembly IEA
 biological_processGO:0098609 cell-cell adhesion IEA
 cellular_componentGO:0000407 phagophore assembly site IDA
 cellular_componentGO:0000421 autophagosome membrane IEA
 cellular_componentGO:0005730 nucleolus IEA
 cellular_componentGO:0005773 vacuole IEA
 cellular_componentGO:0005774 vacuolar membrane IEA
 cellular_componentGO:0005783 endoplasmic reticulum IBA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0016020 membrane IBA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0033116 endoplasmic reticulum-Golgi intermediate compartment membrane IEA
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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