ENSDARG00000012932


Danio rerio

Features
Gene ID: ENSDARG00000012932
  
Biological name :mat2b
  
Synonyms : mat2b / methionine adenosyltransferase II, beta
  
Possible biological names infered from orthology : methionine adenosyltransferase 2B / Methionine adenosyltransferase 2 subunit beta / Q99LB6 / Q9NZL9
  
Species: Danio rerio
  
Chr. number: 21
Strand: -1
Band:
Gene start: 32061725
Gene end: 32082149
  
Corresponding Affymetrix probe sets: Dr.3562.1.A1_at (Zebrafish Array)   Dr.3562.2.S1_at (Zebrafish Array)   NM_001013474_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000123222
Ensembl peptide - ENSDARP00000146808
Ensembl peptide - ENSDARP00000016566
NCBI entrez gene - 541347     See in Manteia.
RefSeq - NM_001013474
RefSeq Peptide - NP_001013492
swissprot - E9QCP2
swissprot - F1RDD5
ZFIN ID - ZDB-GENE-030131-786
Ensembl - ENSDARG00000012932
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 MAT2BENSGALG00000001750Gallus gallus
 MAT2BENSG00000038274Homo sapiens
 Mat2bENSMUSG00000042032Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR005913  dTDP-4-dehydrorhamnose reductase family
 IPR016040  NAD(P)-binding domain
 IPR029903  RmlD-like substrate binding domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006556 S-adenosylmethionine biosynthetic process IEA
 biological_processGO:0006730 one-carbon metabolic process IEA


Pathways (from Reactome)
Pathway description
Methylation
Ub-specific processing proteases


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000040334 mat2aa / methionine adenosyltransferase II, alpha a / MAT2A* / Q3THS6* / P31153* / methionine adenosyltransferase 2A* / methionine adenosyltransferase II, alpha*  / complex
 ENSDARG00000037121 mat2ab / methionine adenosyltransferase II, alpha b / MAT2A* / Q3THS6* / P31153* / methionine adenosyltransferase 2A* / methionine adenosyltransferase II, alpha*  / complex






 

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contact: otassy@igbmc.fr