ENSDARG00000013475


Danio rerio

Features
Gene ID: ENSDARG00000013475
  
Biological name :cct4
  
Synonyms : cct4 / chaperonin containing TCP1, subunit 4 (delta)
  
Possible biological names infered from orthology : chaperonin containing TCP1 subunit 4 / P50991 / P80315
  
Species: Danio rerio
  
Chr. number: 1
Strand: -1
Band:
Gene start: 53701801
Gene end: 53714885
  
Corresponding Affymetrix probe sets: Dr.24206.1.S1_at (Zebrafish Array)   NM_200583_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000025466
NCBI entrez gene - 393555     See in Manteia.
RefSeq - NM_200583
RefSeq Peptide - NP_956877
swissprot - Q6PH46
ZFIN ID - ZDB-GENE-040426-1421
Ensembl - ENSDARG00000013475
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CCT4ENSGALG00000008812Gallus gallus
 CCT4ENSG00000115484Homo sapiens
 Cct4ENSMUSG00000007739Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR002194  Chaperonin TCP-1, conserved site
 IPR002423  Chaperonin Cpn60/TCP-1 family
 IPR012717  T-complex protein 1, delta subunit
 IPR017998  Chaperone tailless complex polypeptide 1 (TCP-1)
 IPR027409  GroEL-like apical domain superfamily
 IPR027413  GroEL-like equatorial domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001666 response to hypoxia IDA
 biological_processGO:0006457 protein folding IEA
 biological_processGO:0006458 "de novo" protein folding IBA
 biological_processGO:0061077 chaperone-mediated protein folding IBA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005832 chaperonin-containing T-complex IBA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0044183 protein binding involved in protein folding IBA
 molecular_functionGO:0051082 unfolded protein binding IEA


Pathways (from Reactome)
Pathway description
Association of TriC/CCT with target proteins during biosynthesis
Cooperation of PDCL (PhLP1) and TRiC/CCT in G-protein beta folding


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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