ENSDARG00000013505


Danio rerio

Features
Gene ID: ENSDARG00000013505
  
Biological name :ube2kb
  
Synonyms : ube2kb / ubiquitin-conjugating enzyme E2Kb (UBC1 homolog, yeast)
  
Possible biological names infered from orthology : P61086 / P61087 / UBE2K / ubiquitin conjugating enzyme E2 K
  
Species: Danio rerio
  
Chr. number: 1
Strand: 1
Band:
Gene start: 23311617
Gene end: 23322969
  
Corresponding Affymetrix probe sets: Dr.14652.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000018676
Ensembl peptide - ENSDARP00000120324
NCBI entrez gene - 30100     See in Manteia.
swissprot - A0A0A0MPF4
swissprot - Q5PR60
ZFIN ID - ZDB-GENE-980605-9
Ensembl - ENSDARG00000013505
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 UBE2KENSGALG00000014290Gallus gallus
 UBE2KENSG00000078140Homo sapiens
 Ube2kENSMUSG00000029203Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ube2ka / ubiquitin-conjugating enzyme E2Ka (UBC1 homolog, yeast) / UBE2K* / P61086* / ubiquitin conjugating enzyme E2 K*ENSDARG0000008905588


Protein motifs (from Interpro)
Interpro ID Name
 IPR000608  Ubiquitin-conjugating enzyme E2
 IPR009060  UBA-like superfamily
 IPR015940  Ubiquitin-associated domain
 IPR016135  Ubiquitin-conjugating enzyme/RWD-like
 IPR023313  Ubiquitin-conjugating enzyme, active site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000209 protein polyubiquitination IBA
 biological_processGO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IBA
 cellular_componentGO:0005634 nucleus IBA
 cellular_componentGO:0005737 cytoplasm IBA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0031625 ubiquitin protein ligase binding IBA
 molecular_functionGO:0061630 ubiquitin protein ligase activity IBA


Pathways (from Reactome)
Pathway description
Synthesis of active ubiquitin: roles of E1 and E2 enzymes
Antigen processing: Ubiquitination & Proteasome degradation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr