ENSDARG00000013667


Danio rerio

Features
Gene ID: ENSDARG00000013667
  
Biological name :tbck
  
Synonyms : TBC1 domain containing kinase / tbck
  
Possible biological names infered from orthology : Q8TEA7
  
Species: Danio rerio
  
Chr. number: 1
Strand: -1
Band:
Gene start: 50198607
Gene end: 50293948
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000053027
Ensembl peptide - ENSDARP00000143948
Ensembl peptide - ENSDARP00000109057
Ensembl peptide - ENSDARP00000043308
NCBI entrez gene - 791155     See in Manteia.
RefSeq - NM_001080637
RefSeq - XM_005160101
RefSeq Peptide - NP_001074106
swissprot - E7F1V3
swissprot - B0UXU4
ZFIN ID - ZDB-GENE-070112-1062
Ensembl - ENSDARG00000013667
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TBCKENSGALG00000010564Gallus gallus
 TBCKENSG00000145348Homo sapiens
 TbckENSMUSG00000028030Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
tbc1d22a / TBC1 domain family, member 22a / Q8R5A6* / Q8WUA7*ENSDARG0000004551011
tbc1d22b / TBC1 domain family, member 22B / Q9NU19*ENSDARG0000002698810


Protein motifs (from Interpro)
Interpro ID Name
 IPR000195  Rab-GTPase-TBC domain
 IPR000719  Protein kinase domain
 IPR001763  Rhodanese-like domain
 IPR011009  Protein kinase-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006468 protein phosphorylation IEA
 biological_processGO:0006886 intracellular protein transport IBA
 biological_processGO:0031338 regulation of vesicle fusion IBA
 biological_processGO:0090630 activation of GTPase activity IBA
 cellular_componentGO:0005622 intracellular IBA
 cellular_componentGO:0012505 endomembrane system IBA
 molecular_functionGO:0004672 protein kinase activity IEA
 molecular_functionGO:0005096 GTPase activator activity IBA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0017137 Rab GTPase binding IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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