ENSDARG00000045510


Danio rerio

Features
Gene ID: ENSDARG00000045510
  
Biological name :tbc1d22a
  
Synonyms : tbc1d22a / TBC1 domain family, member 22a
  
Possible biological names infered from orthology : Q8R5A6 / Q8WUA7
  
Species: Danio rerio
  
Chr. number: 4
Strand: -1
Band:
Gene start: 27626869
Gene end: 27897315
  
Corresponding Affymetrix probe sets: Dr.26270.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000147677
Ensembl peptide - ENSDARP00000066923
Ensembl peptide - ENSDARP00000066924
NCBI entrez gene - 407720     See in Manteia.
swissprot - F1REN9
swissprot - F1REP0
ZFIN ID - ZDB-GENE-041114-144
Ensembl - ENSDARG00000045510
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TBC1D22AENSGALG00000043058Gallus gallus
 Q8WUA7ENSG00000054611Homo sapiens
 Q8R5A6ENSMUSG00000051864Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
tbc1d22b / TBC1 domain family, member 22B / Q9NU19*ENSDARG0000002698856
tbck / TBC1 domain containing kinase / Q8TEA7*ENSDARG0000001366718


Protein motifs (from Interpro)
Interpro ID Name
 IPR000195  Rab-GTPase-TBC domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006886 intracellular protein transport IBA
 biological_processGO:0031338 regulation of vesicle fusion IBA
 biological_processGO:0090630 activation of GTPase activity IBA
 cellular_componentGO:0005622 intracellular IBA
 cellular_componentGO:0012505 endomembrane system IBA
 molecular_functionGO:0005096 GTPase activator activity IBA
 molecular_functionGO:0017137 Rab GTPase binding IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr