ENSDARG00000013931


Danio rerio

Features
Gene ID: ENSDARG00000013931
  
Biological name :eif3m
  
Synonyms : eif3m / eukaryotic translation initiation factor 3, subunit M / Q7T3B0
  
Possible biological names infered from orthology : Q7L2H7 / Q99JX4
  
Species: Danio rerio
  
Chr. number: 18
Strand: 1
Band:
Gene start: 45645357
Gene end: 45658076
  
Corresponding Affymetrix probe sets: Dr.25567.1.S1_at (Zebrafish Array)   NM_001024735_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000024129
NCBI entrez gene - 334626     See in Manteia.
RefSeq - NM_001024735
RefSeq Peptide - NP_001019906
swissprot - Q7T3B0
ZFIN ID - ZDB-GENE-040426-2643
Ensembl - ENSDARG00000013931
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 EIF3MENSGALG00000012109Gallus gallus
 EIF3MENSG00000149100Homo sapiens
 Eif3mENSMUSG00000027170Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000717  Proteasome component (PCI) domain
 IPR011991  ArsR-like helix-turn-helix domain
 IPR016024  Armadillo-type fold
 IPR027528  Eukaryotic translation initiation factor 3 subunit M


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0002183 cytoplasmic translational initiation IBA
 biological_processGO:0006412 translation IEA
 biological_processGO:0006413 translational initiation IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005852 eukaryotic translation initiation factor 3 complex IBA
 molecular_functionGO:0003743 translation initiation factor activity IEA


Pathways (from Reactome)
Pathway description
L13a-mediated translational silencing of Ceruloplasmin expression
Translation initiation complex formation
Formation of a pool of free 40S subunits
Formation of the ternary complex, and subsequently, the 43S complex
Ribosomal scanning and start codon recognition
GTP hydrolysis and joining of the 60S ribosomal subunit


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr