ENSDARG00000014008


Danio rerio

Features
Gene ID: ENSDARG00000014008
  
Biological name :cwc22
  
Synonyms : cwc22 / CWC22 spliceosome-associated protein homolog (S. cerevisiae)
  
Possible biological names infered from orthology : CWC22 spliceosome associated protein homolog / Gm13691 / Gm13693 / Gm13694 / Gm13695 / Gm13696 / Gm13697 / Gm13698 / Pre-mRNA-splicing factor CWC22 homolog / Q8C5N3 / Q9HCG8
  
Species: Danio rerio
  
Chr. number: 9
Strand: -1
Band:
Gene start: 43552515
Gene end: 43644261
  
Corresponding Affymetrix probe sets: Dr.26336.1.A1_at (Zebrafish Array)   NM_001077569_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000013971
NCBI entrez gene - 566033     See in Manteia.
RefSeq - NM_001077569
RefSeq Peptide - NP_001071037
swissprot - B0S6B1
ZFIN ID - ZDB-GENE-060929-452
Ensembl - ENSDARG00000014008
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CWC22ENSGALG00000009001Gallus gallus
 CWC22ENSG00000163510Homo sapiens
 Cwc22ENSMUSG00000027014Mus musculus
 Gm13691ENSMUSG00000079247Mus musculus
 Gm13693ENSMUSG00000094336Mus musculus
 Gm13694ENSMUSG00000096337Mus musculus
 Gm13695ENSMUSG00000096729Mus musculus
 Gm13696ENSMUSG00000096484Mus musculus
 Gm13697ENSMUSG00000095824Mus musculus
 Gm13698ENSMUSG00000094125Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR003890  MIF4G-like, type 3
 IPR003891  Initiation factor eIF-4 gamma, MA3
 IPR016024  Armadillo-type fold


Gene Ontology (GO)
TypeGO IDTermEv.Code
 molecular_functionGO:0003723 RNA binding IEA


Pathways (from Reactome)
Pathway description
mRNA Splicing - Major Pathway


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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