ENSMUSG00000027014


Mus musculus

Features
Gene ID: ENSMUSG00000027014
  
Biological name :Cwc22
  
Synonyms : Cwc22 / Pre-mRNA-splicing factor CWC22 homolog / Q8C5N3
  
Possible biological names infered from orthology : CWC22 spliceosome associated protein homolog / Q9HCG8
  
Species: Mus musculus
  
Chr. number: 2
Strand: -1
Band: C3
Gene start: 77881159
Gene end: 77946375
  
Corresponding Affymetrix probe sets: 10473322 (MoGene1.0st)   10473325 (MoGene1.0st)   10473328 (MoGene1.0st)   10473331 (MoGene1.0st)   10473334 (MoGene1.0st)   10473337 (MoGene1.0st)   10473340 (MoGene1.0st)   10484249 (MoGene1.0st)   1438278_a_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000107452
Ensembl peptide - ENSMUSP00000107450
Ensembl peptide - ENSMUSP00000107455
Ensembl peptide - ENSMUSP00000122338
Ensembl peptide - ENSMUSP00000115067
Ensembl peptide - ENSMUSP00000064947
Ensembl peptide - ENSMUSP00000107449
NCBI entrez gene - 80744     See in Manteia.
MGI - MGI:2136773
RefSeq - XM_011239856
RefSeq - NM_001290740
RefSeq - NM_030560
RefSeq - NM_172667
RefSeq - XM_006500433
RefSeq - XM_006500434
RefSeq - XM_006500435
RefSeq - XM_006500436
RefSeq - XM_006500437
RefSeq Peptide - NP_766255
RefSeq Peptide - NP_001277669
RefSeq Peptide - NP_085037
swissprot - B1AYU9
swissprot - B1AYU4
swissprot - Q8C5N3
swissprot - B1AYU8
swissprot - B1AYU7
Ensembl - ENSMUSG00000027014
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 cwc22ENSDARG00000014008Danio rerio
 CWC22ENSGALG00000009001Gallus gallus
 CWC22ENSG00000163510Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Gm13693 / CWC22* / Q9HCG8* / CWC22 spliceosome associated protein homolog*ENSMUSG0000009433687
Gm13691 / CWC22* / Q9HCG8* / CWC22 spliceosome associated protein homolog*ENSMUSG0000007924787
Gm13698 / CWC22* / Q9HCG8* / CWC22 spliceosome associated protein homolog*ENSMUSG0000009412587
Gm13696 / CWC22* / Q9HCG8* / CWC22 spliceosome associated protein homolog*ENSMUSG0000009648487
Gm13697 / CWC22* / Q9HCG8* / CWC22 spliceosome associated protein homolog*ENSMUSG0000009582487
Gm13694 / CWC22* / Q9HCG8* / CWC22 spliceosome associated protein homolog*ENSMUSG0000009633787
Gm13695 / CWC22* / Q9HCG8* / CWC22 spliceosome associated protein homolog*ENSMUSG0000009672987


Protein motifs (from Interpro)
Interpro ID Name
 IPR003890  MIF4G-like, type 3
 IPR003891  Initiation factor eIF-4 gamma, MA3
 IPR016024  Armadillo-type fold


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000398 mRNA splicing, via spliceosome IBA
 biological_processGO:0006397 mRNA processing IEA
 biological_processGO:0008380 RNA splicing IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005681 spliceosomal complex ISO
 cellular_componentGO:0005829 cytosol ISO
 cellular_componentGO:0016607 nuclear speck ISO
 cellular_componentGO:0071006 U2-type catalytic step 1 spliceosome IBA
 cellular_componentGO:0071013 catalytic step 2 spliceosome IBA
 molecular_functionGO:0003723 RNA binding IBA
 molecular_functionGO:0005488 binding IEA
 molecular_functionGO:0005515 protein binding IEA


Pathways (from Reactome)
Pathway description
mRNA Splicing - Major Pathway


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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