ENSGALG00000009001


Gallus gallus

Features
Gene ID: ENSGALG00000009001
  
Biological name :CWC22
  
Synonyms : CWC22 / CWC22 spliceosome associated protein homolog
  
Possible biological names infered from orthology : Gm13691 / Gm13693 / Gm13694 / Gm13695 / Gm13696 / Gm13697 / Gm13698 / Pre-mRNA-splicing factor CWC22 homolog / Q8C5N3 / Q9HCG8
  
Species: Gallus gallus
  
Chr. number: 7
Strand: 1
Band:
Gene start: 14833295
Gene end: 14861223
  
Corresponding Affymetrix probe sets: GgaAffx.5692.1.S1_s_at (Chicken Array)   GgaAffx.5692.3.S1_s_at (Chicken Array)   GgaAffx.5692.4.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000014627
Ensembl peptide - ENSGALP00000043058
NCBI entrez gene - 424123     See in Manteia.
RefSeq - XM_015289439
RefSeq - NM_001031250
RefSeq - XM_015289438
RefSeq Peptide - NP_001026421
swissprot - R4GLH6
swissprot - F1NI57
Ensembl - ENSGALG00000009001
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 cwc22ENSDARG00000014008Danio rerio
 CWC22ENSG00000163510Homo sapiens
 Cwc22ENSMUSG00000027014Mus musculus
 Gm13691ENSMUSG00000079247Mus musculus
 Gm13693ENSMUSG00000094336Mus musculus
 Gm13694ENSMUSG00000096337Mus musculus
 Gm13695ENSMUSG00000096729Mus musculus
 Gm13696ENSMUSG00000096484Mus musculus
 Gm13697ENSMUSG00000095824Mus musculus
 Gm13698ENSMUSG00000094125Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR003890  MIF4G-like, type 3
 IPR003891  Initiation factor eIF-4 gamma, MA3
 IPR016021  MIF4G-like domain superfamily
 IPR016024  Armadillo-type fold


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005681 spliceosomal complex IEA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0016607 nuclear speck IEA
 cellular_componentGO:0071007 U2-type catalytic step 2 spliceosome IEA
 cellular_componentGO:0071013 catalytic step 2 spliceosome IEA
 molecular_functionGO:0003723 RNA binding IEA


Pathways (from Reactome)
Pathway description
mRNA Splicing - Major Pathway


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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