ENSDARG00000014013


Danio rerio

Features
Gene ID: ENSDARG00000014013
  
Biological name :lbr
  
Synonyms : lamin B receptor / lbr
  
Possible biological names infered from orthology : Q14739 / Q3U9G9
  
Species: Danio rerio
  
Chr. number: 20
Strand: -1
Band:
Gene start: 36393912
Gene end: 36416922
  
Corresponding Affymetrix probe sets: Dr.25745.1.S1_at (Zebrafish Array)   Dr.26402.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000015055
Ensembl peptide - ENSDARP00000070893
NCBI entrez gene - 368360     See in Manteia.
swissprot - F1QMY2
swissprot - Q5RJ97
ZFIN ID - ZDB-GENE-030804-11
Ensembl - ENSDARG00000014013
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 LBRENSGALG00000009305Gallus gallus
 LBRENSG00000143815Homo sapiens
 LbrENSMUSG00000004880Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
tm7sf2 / transmembrane 7 superfamily member 2 / O76062*ENSDARG0000003281636
dhcr7 / 7-dehydrocholesterol reductase / O88455* / Q9UBM7*ENSDARG0000010322623
si:ch1073-429i10.1ENSDARG0000007566422


Protein motifs (from Interpro)
Interpro ID Name
 IPR001171  Ergosterol biosynthesis ERG4/ERG24
 IPR018083  Sterol reductase, conserved site
 IPR019023  Lamin-B receptor of TUDOR domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0016126 sterol biosynthetic process IBA
 biological_processGO:0042074 cell migration involved in gastrulation IMP
 biological_processGO:0055114 oxidation-reduction process IEA
 cellular_componentGO:0005637 nuclear inner membrane IDA
 cellular_componentGO:0005639 integral component of nuclear inner membrane IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IBA
 molecular_functionGO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor IEA


Pathways (from Reactome)
Pathway description
Cholesterol biosynthesis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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