ENSDARG00000014366


Danio rerio

Features
Gene ID: ENSDARG00000014366
  
Biological name :luc7l3
  
Synonyms : luc7l3 / LUC7-like 3 pre-mRNA splicing factor
  
Possible biological names infered from orthology : Luc7-like protein 3 / O95232 / Q5SUF2
  
Species: Danio rerio
  
Chr. number: 3
Strand: -1
Band:
Gene start: 58805790
Gene end: 58823762
  
Corresponding Affymetrix probe sets: Dr.13152.1.A1_at (Zebrafish Array)   NM_001080591_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000092027
NCBI entrez gene - 724014     See in Manteia.
RefSeq - NM_001080591
RefSeq Peptide - NP_001074060
swissprot - F1Q9F6
ZFIN ID - ZDB-GENE-060616-375
Ensembl - ENSDARG00000014366
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 LUC7L3ENSGALG00000007386Gallus gallus
 LUC7L3ENSG00000108848Homo sapiens
 Luc7l3ENSMUSG00000020863Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
LUC7L2 / zgc:158803 / Q7TNC4* / Q9Y383* / C7orf55-LUC7L2* / C7orf55-LUC7L2 readthrough* / LUC7 like 2, pre-mRNA splicing factor* / Mus musculus LUC7-like 2 (S. cerevisiae) (Luc7l2), transcr...ENSDARG0000001976528
luc7l / LUC7-like (S. cerevisiae) / Q9CYI4* / Q9NQ29* / LUC7 like*ENSDARG0000005590328


Protein motifs (from Interpro)
Interpro ID Name
 IPR004882  Luc7-related


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006376 mRNA splice site selection IBA
 cellular_componentGO:0005685 U1 snRNP IBA
 cellular_componentGO:0071004 U2-type prespliceosome IBA
 molecular_functionGO:0003729 mRNA binding IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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