ENSDARG00000019765


Danio rerio

Features
Gene ID: ENSDARG00000019765
  
Biological name :LUC7L2
  
Synonyms : LUC7L2 / zgc:158803
  
Possible biological names infered from orthology : C7orf55-LUC7L2 / C7orf55-LUC7L2 readthrough / LUC7 like 2, pre-mRNA splicing factor / Mus musculus LUC7-like 2 (S. cerevisiae) (Luc7l2), transcript variant 6, mRNA. / Q7TNC4 / Q9Y383
  
Species: Danio rerio
  
Chr. number: 1
Strand: -1
Band:
Gene start: 55169130
Gene end: 55183088
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000091392
NCBI entrez gene - 100038767     See in Manteia.
swissprot - A3KMT0
ZFIN ID - ZDB-GENE-070424-15
Ensembl - ENSDARG00000019765
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 LUC7L2ENSGALG00000036238Gallus gallus
 C7orf55-LUC7L2ENSG00000269955Homo sapiens
 LUC7L2ENSG00000146963Homo sapiens
 Luc7l2ENSMUSG00000029823Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
luc7l / LUC7-like (S. cerevisiae) / Q9CYI4* / Q9NQ29* / LUC7 like*ENSDARG0000005590361
luc7l3 / LUC7-like 3 pre-mRNA splicing factor / O95232*ENSDARG0000001436631


Protein motifs (from Interpro)
Interpro ID Name
 IPR004882  Luc7-related


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006376 mRNA splice site selection IBA
 cellular_componentGO:0005685 U1 snRNP IBA
 cellular_componentGO:0071004 U2-type prespliceosome IBA
 molecular_functionGO:0003729 mRNA binding IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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