ENSGALG00000036238


Gallus gallus

Features
Gene ID: ENSGALG00000036238
  
Biological name :LUC7L2
  
Synonyms : LUC7L2
  
Possible biological names infered from orthology : C7orf55-LUC7L2 / C7orf55-LUC7L2 readthrough / LUC7 like 2, pre-mRNA splicing factor / Mus musculus LUC7-like 2 (S. cerevisiae) (Luc7l2), transcript variant 6, mRNA. / Q7TNC4 / Q9Y383
  
Species: Gallus gallus
  
Chr. number: 1
Strand: 1
Band:
Gene start: 49145298
Gene end: 49176552
  
Corresponding Affymetrix probe sets: GgaAffx.11720.1.S1_at (Chicken Array)   GgaAffx.7531.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000051007
Ensembl peptide - ENSGALP00000043994
NCBI entrez gene - 417971     See in Manteia.
RefSeq - NM_001030755
RefSeq Peptide - NP_001025926
swissprot - Q5ZLW7
swissprot - A0A1D5PE09
Ensembl - ENSGALG00000036238
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 LUC7L2ENSDARG00000019765Danio rerio
 C7orf55-LUC7L2ENSG00000269955Homo sapiens
 LUC7L2ENSG00000146963Homo sapiens
 Luc7l2ENSMUSG00000029823Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
LUC7L / LUC7 like / Q9CYI4* / Q9NQ29*ENSGALG0000003798354
LUC7L3 / luc7-like protein 3 / O95232* / Q5SUF2* / LUC7 like 3 pre-mRNA splicing factor*ENSGALG0000000738633


Protein motifs (from Interpro)
Interpro ID Name
 IPR004882  Luc7-related


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006376 mRNA splice site selection IEA
 biological_processGO:0045843 negative regulation of striated muscle tissue development ISS
 cellular_componentGO:0005634 nucleus ISS
 cellular_componentGO:0005685 U1 snRNP IEA
 cellular_componentGO:0071004 U2-type prespliceosome IBA
 molecular_functionGO:0003729 mRNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr