ENSMUSG00000029823


Mus musculus

Features
Gene ID: ENSMUSG00000029823
  
Biological name :Luc7l2
  
Synonyms : Luc7l2 / Mus musculus LUC7-like 2 (S. cerevisiae) (Luc7l2), transcript variant 6, mRNA. / Q7TNC4
  
Possible biological names infered from orthology : LUC7 like 2, pre-mRNA splicing factor / Q9Y383
  
Species: Mus musculus
  
Chr. number: 6
Strand: 1
Band: B1
Gene start: 38551334
Gene end: 38609470
  
Corresponding Affymetrix probe sets: 10537397 (MoGene1.0st)   1423251_at (Mouse Genome 430 2.0 Array)   1427087_at (Mouse Genome 430 2.0 Array)   1436165_at (Mouse Genome 430 2.0 Array)   1436766_at (Mouse Genome 430 2.0 Array)   1436767_at (Mouse Genome 430 2.0 Array)   1437761_at (Mouse Genome 430 2.0 Array)   1445717_at (Mouse Genome 430 2.0 Array)   1458423_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000125394
Ensembl peptide - ENSMUSP00000125111
Ensembl peptide - ENSMUSP00000125527
Ensembl peptide - ENSMUSP00000125573
Ensembl peptide - ENSMUSP00000055254
Ensembl peptide - ENSMUSP00000123970
Ensembl peptide - ENSMUSP00000124010
NCBI entrez gene - 192196     See in Manteia.
MGI - MGI:2183260
RefSeq - XM_017321460
RefSeq - NM_138680
RefSeq - XM_006505747
RefSeq - XM_006505748
RefSeq - XM_006505749
RefSeq - XM_006505750
RefSeq - XM_006505754
RefSeq - XM_006505755
RefSeq - XM_011241255
RefSeq - XM_017321457
RefSeq - XM_017321458
RefSeq - XM_017321459
RefSeq - NM_001170848
RefSeq - NM_001170849
RefSeq - NM_001311099
RefSeq - NM_001311100
RefSeq - NM_001331222
RefSeq Peptide - NP_001318151
RefSeq Peptide - NP_619621
RefSeq Peptide - NP_001164319
RefSeq Peptide - NP_001164320
RefSeq Peptide - NP_001298028
RefSeq Peptide - NP_001298029
swissprot - Q05CX5
swissprot - E0CZB9
swissprot - E9Q715
swissprot - Q7TNC4
swissprot - E0CYQ8
Ensembl - ENSMUSG00000029823
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 LUC7L2ENSDARG00000019765Danio rerio
 LUC7L2ENSGALG00000036238Gallus gallus
 LUC7L2ENSG00000146963Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Luc7l / Q9CYI4 / Luc7-like / Q9NQ29*ENSMUSG0000002418869
Luc7l3 / Q5SUF2 / Luc7-like protein 3 / O95232* / LUC7 like 3 pre-mRNA splicing factor*ENSMUSG0000002086335


Protein motifs (from Interpro)
Interpro ID Name
 IPR004882  Luc7-related


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006376 mRNA splice site selection IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0005685 U1 snRNP IEA
 cellular_componentGO:0016607 nuclear speck IEA
 cellular_componentGO:0071004 U2-type prespliceosome IBA
 molecular_functionGO:0003729 mRNA binding IEA
 molecular_functionGO:0019899 enzyme binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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