ENSDARG00000055903


Danio rerio

Features
Gene ID: ENSDARG00000055903
  
Biological name :luc7l
  
Synonyms : luc7l / LUC7-like (S. cerevisiae)
  
Possible biological names infered from orthology : LUC7 like / Q9CYI4 / Q9NQ29
  
Species: Danio rerio
  
Chr. number: 24
Strand: 1
Band:
Gene start: 39638555
Gene end: 39654132
  
Corresponding Affymetrix probe sets: Dr.4159.1.A1_at (Zebrafish Array)   NM_001002116_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000072775
Ensembl peptide - ENSDARP00000121911
Ensembl peptide - ENSDARP00000120824
NCBI entrez gene - 415206     See in Manteia.
RefSeq - NM_001002116
RefSeq Peptide - NP_001002116
swissprot - E9QIH9
swissprot - E9QE89
swissprot - F1R8J8
ZFIN ID - ZDB-GENE-040625-111
Ensembl - ENSDARG00000055903
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 LUC7LENSGALG00000037983Gallus gallus
 LUC7LENSG00000007392Homo sapiens
 Luc7lENSMUSG00000024188Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
LUC7L2 / zgc:158803 / Q7TNC4* / Q9Y383* / C7orf55-LUC7L2* / C7orf55-LUC7L2 readthrough* / LUC7 like 2, pre-mRNA splicing factor* / Mus musculus LUC7-like 2 (S. cerevisiae) (Luc7l2), transcr...ENSDARG0000001976570
luc7l3 / LUC7-like 3 pre-mRNA splicing factor / O95232*ENSDARG0000001436636


Protein motifs (from Interpro)
Interpro ID Name
 IPR004882  Luc7-related
 IPR011990  Tetratricopeptide-like helical domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006376 mRNA splice site selection IEA
 cellular_componentGO:0005685 U1 snRNP IEA
 cellular_componentGO:0071004 U2-type prespliceosome IBA
 molecular_functionGO:0003729 mRNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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