ENSDARG00000014875


Danio rerio

Features
Gene ID: ENSDARG00000014875
  
Biological name :abi2b
  
Synonyms : abi2b / abl-interactor 2b
  
Possible biological names infered from orthology : ABI2 / abl interactor 2 / P62484 / Q9NYB9
  
Species: Danio rerio
  
Chr. number: 6
Strand: 1
Band:
Gene start: 9970733
Gene end: 10010348
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000126256
Ensembl peptide - ENSDARP00000125717
Ensembl peptide - ENSDARP00000125738
Ensembl peptide - ENSDARP00000125616
Ensembl peptide - ENSDARP00000065470
Ensembl peptide - ENSDARP00000126027
NCBI entrez gene - 692331     See in Manteia.
RefSeq - NM_001045297
RefSeq Peptide - NP_001038762
swissprot - I3IS53
swissprot - I3IRV8
swissprot - I3IS72
swissprot - I3ISX7
swissprot - I3ITI8
swissprot - Q1JPU9
ZFIN ID - ZDB-GENE-060519-5
Ensembl - ENSDARG00000014875
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ABI2ENSGALG00000008714Gallus gallus
 ABI2ENSG00000138443Homo sapiens
 Abi2ENSMUSG00000026782Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
abi2a / abl-interactor 2a / ABI2* / P62484* / Q9NYB9* / abl interactor 2*ENSDARG0000005820770
abi1a / abl-interactor 1a / ABI1* / Q8CBW3* / Q8IZP0* / abl interactor 1*ENSDARG0000001015566
abi1b / abl-interactor 1b / ABI1* / Q8CBW3* / Q8IZP0* / abl interactor 1*ENSDARG0000006299164
abi3a / ABI family, member 3a / ABI3* / Q9P2A4* / Q8BYZ1* / ABI family member 3* / ABI gene family, member 3*ENSDARG0000006007233
abi3b / ABI family, member 3b / ABI3* / Q9P2A4* / Q8BYZ1* / ABI family member 3* / ABI gene family, member 3*ENSDARG0000006328322


Protein motifs (from Interpro)
Interpro ID Name
 IPR000727  Target SNARE coiled-coil homology domain
 IPR001452  SH3 domain
 IPR012849  Abl-interactor, homeo-domain homologous domain
 IPR028456  Abl interactor 1
 IPR028457  ABI family


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008154 actin polymerization or depolymerization IEA
 biological_processGO:0061098 positive regulation of protein tyrosine kinase activity IEA
 molecular_functionGO:0030296 protein tyrosine kinase activator activity IEA


Pathways (from Reactome)
Pathway description
Regulation of actin dynamics for phagocytic cup formation
VEGFA-VEGFR2 Pathway
RHO GTPases Activate WASPs and WAVEs


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr