ENSDARG00000015015


Danio rerio

Features
Gene ID: ENSDARG00000015015
  
Biological name :tspan18b
  
Synonyms : tetraspanin 18b / tspan18b
  
Possible biological names infered from orthology : Q80WR1 / Q96SJ8 / tetraspanin 18 / TSPAN18
  
Species: Danio rerio
  
Chr. number: 18
Strand: 1
Band:
Gene start: 27732285
Gene end: 27813164
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000156251
Ensembl peptide - ENSDARP00000122179
NCBI entrez gene - 436712     See in Manteia.
RefSeq - NM_001002439
RefSeq - XM_005159172
RefSeq Peptide - NP_001002439
swissprot - A3KQH0
ZFIN ID - ZDB-GENE-040718-137
Ensembl - ENSDARG00000015015
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TSPAN18ENSGALG00000036901Gallus gallus
 Q96SJ8ENSG00000157570Homo sapiens
 Q80WR1ENSMUSG00000027217Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
tspan18a / tetraspanin 18a / Q80WR1* / Q96SJ8* / TSPAN18* / tetraspanin 18*ENSDARG0000005665683
tspan9a / tetraspanin 9a / O75954* / Q8BJU2* / TSPAN9* / tetraspanin 9* / Mus musculus tetraspanin 9 (Tspan9), transcript variant 2, mRNA.*ENSDARG0000002529933
tspan34 / tetraspanin 34ENSDARG0000010395132
Q6GMK6 / tspan9b / tetraspanin 9b / O75954* / Q8BJU2* / TSPAN9* / tetraspanin 9* / Mus musculus tetraspanin 9 (Tspan9), transcript variant 2, mRNA.*ENSDARG0000004570632
tspan35 / tetraspanin 35ENSDARG0000002575730
tspan1 / tetraspanin 1 / O60635* / Q99J59*ENSDARG0000005202730
cd82b / CD82 molecule b / CD82* / P27701* / P40237* / CD82 molecule* / CD82 antigen *ENSDARG0000002607028
cd9b / CD9 molecule b / CD9* / P21926* / P40240* / CD9 molecule* / CD9 antigen *ENSDARG0000001669127
tspan2a / tetraspanin 2a / O60636* / Q922J6* / TSPAN2* / tetraspanin 2*ENSDARG0000000375426
cd82a / CD82 molecule a / CD82* / P27701* / P40237* / CD82 molecule* / CD82 antigen *ENSDARG0000001909826
cd9a / CD9 molecule a / CD9* / P21926* / P40240* / CD9 molecule* / CD9 antigen *ENSDARG0000000584226
tspan4a / tetraspanin 4a / O14817* / TSPAN4* / tetraspanin 4*ENSDARG0000008935426
tspan4b / tetraspanin 4bENSDARG0000007039126
zgc:64051 / CD53* / P19397* / Q61451* / CD53 molecule* / Leukocyte surface antigen CD53 *ENSDARG0000006823325
cd81a / CD81 molecule a / CD81* / P35762* / P60033* / CD81 molecule* / CD81 antigen *ENSDARG0000003608024
tspan2b / tetraspanin 2b / O60636* / Q922J6* / TSPAN2* / tetraspanin 2*ENSDARG0000005920223
cd81b / CD81 molecule b / CD81* / P60033* / CD81 molecule*ENSDARG0000002243723
zgc:171713ENSDARG0000007551521
si:ch73-139j3.4 / P0C672* / TSPAN19* / tetraspanin 19*ENSDARG0000008804417


Protein motifs (from Interpro)
Interpro ID Name
 IPR000301  Tetraspanin
 IPR008952  Tetraspanin, EC2 domain superfamily
 IPR018499  Tetraspanin/Peripherin
 IPR018503  Tetraspanin, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007166 cell surface receptor signaling pathway IBA
 cellular_componentGO:0005887 integral component of plasma membrane IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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