ENSDARG00000015709


Danio rerio

Features
Gene ID: ENSDARG00000015709
  
Biological name :hsd17b12a
  
Synonyms : hsd17b12a / hydroxysteroid (17-beta) dehydrogenase 12a / Q6P3L6
  
Possible biological names infered from orthology : HSD17B12 / hydroxysteroid 17-beta dehydrogenase 12 / O70503 / Q53GQ0
  
Species: Danio rerio
  
Chr. number: 25
Strand: 1
Band:
Gene start: 30196039
Gene end: 30230559
  
Corresponding Affymetrix probe sets: Dr.9000.1.S1_at (Zebrafish Array)   NM_200881_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000014003
NCBI entrez gene - 327417     See in Manteia.
RefSeq - NM_200881
RefSeq Peptide - NP_957175
swissprot - Q6P3L6
ZFIN ID - ZDB-GENE-030131-5628
Ensembl - ENSDARG00000015709
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 HSD17B12ENSGALG00000036787Gallus gallus
 Q53GQ0ENSG00000149084Homo sapiens
 O70503ENSMUSG00000027195Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q6QA33 / hsd17b12b / hydroxysteroid (17-beta) dehydrogenase 12b / O70503* / Q53GQ0* / HSD17B12* / hydroxysteroid 17-beta dehydrogenase 12*ENSDARG0000003587266
hsd20b2 / hydroxysteroid (20-beta) dehydrogenase 2ENSDARG0000003133640
hsd17b3 / hydroxysteroid (17-beta) dehydrogenase 3 / P37058* / P70385*ENSDARG0000002328731
hsdl1 / A5WWC6 / hydroxysteroid dehydrogenase like 1 / Q3SXM5*ENSDARG0000004173628


Protein motifs (from Interpro)
Interpro ID Name
 IPR002347  Short-chain dehydrogenase/reductase SDR
 IPR016040  NAD(P)-binding domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006629 lipid metabolic process IEA
 biological_processGO:0006633 fatty acid biosynthetic process IEA
 biological_processGO:0006694 steroid biosynthetic process IEA
 biological_processGO:0006703 estrogen biosynthetic process IEA
 biological_processGO:0055114 oxidation-reduction process IEA
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0005789 endoplasmic reticulum membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0004303 estradiol 17-beta-dehydrogenase activity IEA
 molecular_functionGO:0016491 oxidoreductase activity IEA
 molecular_functionGO:0102339 3-oxo-arachidoyl-CoA reductase activity IEA
 molecular_functionGO:0102340 3-oxo-behenoyl-CoA reductase activity IEA
 molecular_functionGO:0102341 3-oxo-lignoceroyl-CoA reductase activity IEA
 molecular_functionGO:0102342 3-oxo-cerotoyl-CoA reductase activity IEA


Pathways (from Reactome)
Pathway description
Androgen biosynthesis
Synthesis of very long-chain fatty acyl-CoAs


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

1 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr