ENSDARG00000015998


Danio rerio

Features
Gene ID: ENSDARG00000015998
  
Biological name :wdhd1
  
Synonyms : wdhd1 / WD repeat and HMG-box DNA binding protein 1
  
Possible biological names infered from orthology : O75717 / P59328
  
Species: Danio rerio
  
Chr. number: 17
Strand: -1
Band:
Gene start: 15148797
Gene end: 15189502
  
Corresponding Affymetrix probe sets: Dr.425.1.A1_at (Zebrafish Array)   NM_001002726_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000099718
Ensembl peptide - ENSDARP00000113096
Ensembl peptide - ENSDARP00000115064
Ensembl peptide - ENSDARP00000126539
NCBI entrez gene - 436999     See in Manteia.
RefSeq - NM_001002726
RefSeq - XM_009292886
RefSeq - XM_021467145
RefSeq Peptide - NP_001002726
swissprot - F1Q7G1
swissprot - A0A0R4J7S6
swissprot - E7F296
swissprot - K7DYL0
ZFIN ID - ZDB-GENE-030131-1665
Ensembl - ENSDARG00000015998
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 WDHD1ENSGALG00000012199Gallus gallus
 WDHD1ENSG00000198554Homo sapiens
 Wdhd1ENSMUSG00000037572Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001680  WD40 repeat
 IPR009071  High mobility group box domain
 IPR011042  Six-bladed beta-propeller, TolB-like
 IPR013979  Translation initiation factor, beta propellor-like domain
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR017986  WD40-repeat-containing domain
 IPR019775  WD40 repeat, conserved site
 IPR022100  Minichromosome loss protein Mcl1, middle region


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0003677 DNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr