ENSGALG00000012199


Gallus gallus

Features
Gene ID: ENSGALG00000012199
  
Biological name :WDHD1
  
Synonyms : WDHD1 / WD repeat and HMG-box DNA binding protein 1
  
Possible biological names infered from orthology : O75717 / P59328
  
Species: Gallus gallus
  
Chr. number: 5
Strand: 1
Band:
Gene start: 56437831
Gene end: 56465981
  
Corresponding Affymetrix probe sets: GgaAffx.7733.1.S1_s_at (Chicken Array)   GgaAffx.7733.2.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000050859
NCBI entrez gene - 423558     See in Manteia.
RefSeq - XM_015287925
RefSeq - XM_421449
swissprot - A0A1D5PDL4
Ensembl - ENSGALG00000012199
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 wdhd1ENSDARG00000015998Danio rerio
 WDHD1ENSG00000198554Homo sapiens
 Wdhd1ENSMUSG00000037572Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001680  WD40 repeat
 IPR009071  High mobility group box domain
 IPR013979  Translation initiation factor, beta propellor-like domain
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR017986  WD40-repeat-containing domain
 IPR019775  WD40 repeat, conserved site
 IPR022100  Minichromosome loss protein Mcl1, middle region


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006396 RNA processing IEA
 biological_processGO:0033044 regulation of chromosome organization IEA
 biological_processGO:0070829 heterochromatin maintenance IEA
 cellular_componentGO:0000775 chromosome, centromeric region IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003682 chromatin binding IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0070063 RNA polymerase binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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