ENSG00000198554


Homo sapiens

Features
Gene ID: ENSG00000198554
  
Biological name :WDHD1
  
Synonyms : O75717 / WDHD1 / WD repeat and HMG-box DNA binding protein 1
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 14
Strand: -1
Band: q22.3
Gene start: 54938950
Gene end: 55027105
  
Corresponding Affymetrix probe sets: 204727_at (Human Genome U133 Plus 2.0 Array)   204728_s_at (Human Genome U133 Plus 2.0 Array)   216228_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000456806
Ensembl peptide - ENSP00000353793
Ensembl peptide - ENSP00000399349
Ensembl peptide - ENSP00000413435
NCBI entrez gene - 11169     See in Manteia.
OMIM - 608126
RefSeq - XM_017020941
RefSeq - NM_001008396
RefSeq - NM_007086
RefSeq - XM_006720012
RefSeq - XM_011536373
RefSeq - XM_017020940
RefSeq Peptide - NP_001008397
RefSeq Peptide - NP_009017
swissprot - H3BSQ1
swissprot - O75717
swissprot - C9JYB3
Ensembl - ENSG00000198554
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 wdhd1ENSDARG00000015998Danio rerio
 WDHD1ENSGALG00000012199Gallus gallus
 Wdhd1ENSMUSG00000037572Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001680  WD40 repeat
 IPR009071  High mobility group box domain
 IPR011042  Six-bladed beta-propeller, TolB-like
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR017986  WD40-repeat-containing domain
 IPR019775  WD40 repeat, conserved site
 IPR022100  Minichromosome loss protein Mcl1, middle region
 IPR024977  Anaphase-promoting complex subunit 4, WD40 domain
 IPR036322  WD40-repeat-containing domain superfamily
 IPR036910  High mobility group box domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IEA
 biological_processGO:0006396 RNA processing IEA
 biological_processGO:0033044 regulation of chromosome organization IEA
 biological_processGO:0070829 heterochromatin maintenance IEA
 cellular_componentGO:0000775 chromosome, centromeric region IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm TAS
 cellular_componentGO:0005737 cytoplasm TAS
 molecular_functionGO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding ISM
 molecular_functionGO:0003677 DNA binding TAS
 molecular_functionGO:0003682 chromatin binding IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0005515 protein binding IEA
 molecular_functionGO:0070063 RNA polymerase binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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