ENSDARG00000016044


Danio rerio

Features
Gene ID: ENSDARG00000016044
  
Biological name :gins4
  
Synonyms : gins4 / GINS complex subunit 4 (Sld5 homolog)
  
Possible biological names infered from orthology : DNA replication complex GINS protein SLD5 DNA replication complex GINS protein SLD5, N-terminally processed / GINS complex subunit 4 / Q99LZ3 / Q9BRT9
  
Species: Danio rerio
  
Chr. number: 8
Strand: 1
Band:
Gene start: 52415603
Gene end: 52431522
  
Corresponding Affymetrix probe sets: Dr.19458.1.A1_at (Zebrafish Array)   NM_001003546_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000003132
Ensembl peptide - ENSDARP00000151126
NCBI entrez gene - 572562     See in Manteia.
RefSeq - NM_001003546
RefSeq Peptide - NP_001003546
swissprot - F1QJF7
swissprot - Q6DC44
ZFIN ID - ZDB-GENE-040801-59
Ensembl - ENSDARG00000016044
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 GINS4ENSGALG00000045374Gallus gallus
 GINS4ENSG00000147536Homo sapiens
 Gins4ENSMUSG00000031546Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR008591  GINS complex subunit Sld5
 IPR021151  GINS subunit, domain A
 IPR031633  DNA replication complex GINS protein SLD5, C-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000727 double-strand break repair via break-induced replication IBA
 biological_processGO:0006260 DNA replication IEA
 biological_processGO:0006261 DNA-dependent DNA replication IEA
 biological_processGO:0006270 DNA replication initiation IBA
 biological_processGO:0032508 DNA duplex unwinding IEA
 cellular_componentGO:0000811 GINS complex IBA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0031298 replication fork protection complex IBA
 molecular_functionGO:0043138 3"-5" DNA helicase activity IBA


Pathways (from Reactome)
Pathway description
Unwinding of DNA


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000002304 gins2 / GINS complex subunit 2 / Q9D600* / Q9Y248* / DNA replication complex GINS protein PSF2 *  / complex / reaction






 

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