ENSDARG00000016084


Danio rerio

Features
Gene ID: ENSDARG00000016084
  
Biological name :spsb4a
  
Synonyms : splA/ryanodine receptor domain and SOCS box containing 4a / spsb4a
  
Possible biological names infered from orthology : Q8R5B6 / Q96A44 / splA/ryanodine receptor domain and SOCS box containing 4 / SPRY domain-containing SOCS box protein 4 / SPSB4
  
Species: Danio rerio
  
Chr. number: 2
Strand: -1
Band:
Gene start: 39584066
Gene end: 39675829
  
Corresponding Affymetrix probe sets: Dr.4135.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000112876
NCBI entrez gene - 557906     See in Manteia.
RefSeq - NM_001256642
RefSeq Peptide - NP_001243571
swissprot - B0S5W3
ZFIN ID - ZDB-GENE-070911-3
Ensembl - ENSDARG00000016084
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SPSB4ENSGALG00000032053Gallus gallus
 SPSB4ENSG00000175093Homo sapiens
 Spsb4ENSMUSG00000046997Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
spsb1 / splA/ryanodine receptor domain and SOCS box containing 1 / Q96BD6* / Q9D5L7* / SPRY domain-containing SOCS box protein 1 *ENSDARG0000005651576
spsb4b / splA/ryanodine receptor domain and SOCS box containing 4bENSDARG0000004053868
si:ch1073-228j22.2 / SPSB2* / Q99619* / O88838* / SPRY domain-containing SOCS box protein 2 * / splA/ryanodine receptor domain and SOCS box containing 2*ENSDARG0000008898531
fbxo45 / F-box protein 45 / P0C2W1* / Q8K3B1* / F-box/SPRY domain-containing protein 1 *ENSDARG0000007149230


Protein motifs (from Interpro)
Interpro ID Name
 IPR001496  SOCS box domain
 IPR001870  B30.2/SPRY domain
 IPR003877  SPRY domain
 IPR013320  Concanavalin A-like lectin/glucanase domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
No match


Pathways (from Reactome)
Pathway description
Neddylation
Antigen processing: Ubiquitination & Proteasome degradation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr