ENSDARG00000016207


Danio rerio

Features
Gene ID: ENSDARG00000016207
  
Biological name :zgc:112408
  
Synonyms : zgc:112408
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 24
Strand: 1
Band:
Gene start: 24064562
Gene end: 24071024
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000117311
NCBI entrez gene - 550260     See in Manteia.
RefSeq - NM_001017597
RefSeq Peptide - NP_001017597
swissprot - F1QP86
ZFIN ID - ZDB-GENE-050417-63
Ensembl - ENSDARG00000016207
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
stom / stomatin / P27105* / P54116* / Erythrocyte band 7 integral membrane protein *ENSDARG0000000383557
stoml3b / stomatin (EPB72)-like 3b / Q8TAV4* / STOML3* / Q6PE84* / stomatin like 3* / stomatin (Epb7.2)-like 3*ENSDARG0000005703555
stoml3a / stomatin (EPB72)-like 3a / Q8TAV4* / STOML3* / stomatin like 3*ENSDARG0000007991454
nphs2 / nephrosis 2, idiopathic, steroid-resistant (podocin) / Q9NP85* / Q91X05* / Podocin * / NPHS2, podocin*ENSDARG0000004285034
stoml1 / stomatin (EPB72)-like 1 / Q9UBI4* / stomatin like 1*ENSDARG0000006214226
stoml2 / stomatin (EPB72)-like 2 / Q9UJZ1* / stomatin like 2*ENSDARG0000010313523


Protein motifs (from Interpro)
Interpro ID Name
 IPR001107  Band 7 domain
 IPR001972  Stomatin family
 IPR028519  Stomatin-like protein 3


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr