ENSDARG00000003835


Danio rerio

Features
Gene ID: ENSDARG00000003835
  
Biological name :stom
  
Synonyms : stom / stomatin
  
Possible biological names infered from orthology : Erythrocyte band 7 integral membrane protein / P27105 / P54116
  
Species: Danio rerio
  
Chr. number: 21
Strand: 1
Band:
Gene start: 17541634
Gene end: 17570251
  
Corresponding Affymetrix probe sets: Dr.613.1.S1_at (Zebrafish Array)   Dr.613.1.S2_at (Zebrafish Array)   NM_131758_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000152629
Ensembl peptide - ENSDARP00000010282
Ensembl peptide - ENSDARP00000120230
Ensembl peptide - ENSDARP00000133615
NCBI entrez gene - 81534     See in Manteia.
RefSeq - NM_131758
RefSeq - NM_001320073
RefSeq Peptide - NP_001307002
RefSeq Peptide - NP_571833
swissprot - F1QCQ7
swissprot - A0A0R4IGK4
swissprot - O93423
ZFIN ID - ZDB-GENE-980526-486
Ensembl - ENSDARG00000003835
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 STOMENSGALG00000001434Gallus gallus
 STOMENSG00000148175Homo sapiens
 StomENSMUSG00000026880Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
stoml3b / stomatin (EPB72)-like 3b / Q8TAV4* / STOML3* / Q6PE84* / stomatin like 3* / stomatin (Epb7.2)-like 3*ENSDARG0000005703571
stoml3a / stomatin (EPB72)-like 3a / Q8TAV4* / STOML3* / stomatin like 3*ENSDARG0000007991466
zgc:112408ENSDARG0000001620759
nphs2 / nephrosis 2, idiopathic, steroid-resistant (podocin) / Q9NP85* / Q91X05* / Podocin * / NPHS2, podocin*ENSDARG0000004285035
stoml1 / stomatin (EPB72)-like 1 / Q9UBI4* / stomatin like 1*ENSDARG0000006214225
stoml2 / stomatin (EPB72)-like 2 / Q9UJZ1* / stomatin like 2*ENSDARG0000010313524


Protein motifs (from Interpro)
Interpro ID Name
 IPR001107  Band 7 domain
 IPR001972  Stomatin family
 IPR018080  Band 7/stomatin-like, conserved site
 IPR028515  Erythrocyte band 7 integral membrane protein (Stomatin)


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005887 integral component of plasma membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
Stimuli-sensing channels
Neutrophil degranulation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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