ENSMUSG00000026880


Mus musculus

Features
Gene ID: ENSMUSG00000026880
  
Biological name :Stom
  
Synonyms : Erythrocyte band 7 integral membrane protein / P54116 / Stom
  
Possible biological names infered from orthology : P27105 / stomatin
  
Species: Mus musculus
  
Chr. number: 2
Strand: -1
Band: B
Gene start: 35313986
Gene end: 35336976
  
Corresponding Affymetrix probe sets: 10482030 (MoGene1.0st)   1419097_a_at (Mouse Genome 430 2.0 Array)   1419098_at (Mouse Genome 430 2.0 Array)   1419099_x_at (Mouse Genome 430 2.0 Array)   1438910_a_at (Mouse Genome 430 2.0 Array)   1449341_a_at (Mouse Genome 430 2.0 Array)   1452522_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000028241
NCBI entrez gene - 13830     See in Manteia.
MGI - MGI:95403
RefSeq - NM_013515
RefSeq Peptide - NP_038543
swissprot - P54116
Ensembl - ENSMUSG00000026880
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 stomENSDARG00000003835Danio rerio
 STOMENSGALG00000001434Gallus gallus
 STOMENSG00000148175Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q6PE84 / Stoml3 / stomatin (Epb7.2)-like 3 / Q8TAV4* / stomatin like 3*ENSMUSG0000002774463
Nphs2 / Q91X05 / Podocin / Q9NP85* / NPHS2, podocin*ENSMUSG0000002660250
Stoml1 / stomatin like 1 / Q9UBI4*ENSMUSG0000003233327
Q99JB2 / Stoml2 / Stomatin-like protein 2, mitochondrial / Q9UJZ1* / stomatin like 2*ENSMUSG0000002845526


Protein motifs (from Interpro)
Interpro ID Name
 IPR001107  Band 7 domain
 IPR001972  Stomatin family
 IPR018080  Band 7/stomatin-like, conserved site
 IPR028515  Erythrocyte band 7 integral membrane protein (Stomatin)
 IPR036013  Band 7/SPFH domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0034765 regulation of ion transmembrane transport IDA
 biological_processGO:0044829 positive regulation by host of viral genome replication IMP
 biological_processGO:0048524 positive regulation of viral process IMP
 biological_processGO:0051260 protein homooligomerization IEA
 biological_processGO:0090314 positive regulation of protein targeting to membrane IMP
 biological_processGO:1901585 regulation of acid-sensing ion channel activity IDA
 cellular_componentGO:0005737 cytoplasm IDA
 cellular_componentGO:0005739 mitochondrion IDA
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0005856 cytoskeleton ISO
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0005887 integral component of plasma membrane ISS
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0031410 cytoplasmic vesicle IEA
 cellular_componentGO:0042470 melanosome IEA
 cellular_componentGO:0045121 membrane raft ISO
 cellular_componentGO:0048471 perinuclear region of cytoplasm IDA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0042802 identical protein binding IPI
 molecular_functionGO:0042803 protein homodimerization activity IPI
 molecular_functionGO:0070063 RNA polymerase binding IEA


Pathways (from Reactome)
Pathway description
Stimuli-sensing channels
Neutrophil degranulation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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