ENSGALG00000001434


Gallus gallus

Features
Gene ID: ENSGALG00000001434
  
Biological name :STOM
  
Synonyms : STOM / stomatin
  
Possible biological names infered from orthology : Erythrocyte band 7 integral membrane protein / P27105 / P54116
  
Species: Gallus gallus
  
Chr. number: 17
Strand: -1
Band:
Gene start: 8909345
Gene end: 8919459
  
Corresponding Affymetrix probe sets: Gga.6267.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000034251
Ensembl peptide - ENSGALP00000062224
NCBI entrez gene - 417118     See in Manteia.
RefSeq - XM_415401
swissprot - A0A1L1RTT4
swissprot - E1BTV1
Ensembl - ENSGALG00000001434
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 stomENSDARG00000003835Danio rerio
 STOMENSG00000148175Homo sapiens
 StomENSMUSG00000026880Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
STOML3 / stomatin like 3 / Q6PE84* / Q8TAV4* / stomatin (Epb7.2)-like 3*ENSGALG0000001703965
NPHS2 / NPHS2, podocin / Q91X05* / Q9NP85* / Podocin *ENSGALG0000000416344
STOML1 / stomatin like 1 / Q9UBI4*ENSGALG0000000147026
Q99JB2* / Q9UJZ1* / STOML2* / stomatin like 2* / Stomatin-like protein 2, mitochondrial *ENSGALG0000000206423


Protein motifs (from Interpro)
Interpro ID Name
 IPR001107  Band 7 domain
 IPR001972  Stomatin family
 IPR018080  Band 7/stomatin-like, conserved site
 IPR028515  Erythrocyte band 7 integral membrane protein (Stomatin)


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0034765 regulation of ion transmembrane transport IEA
 biological_processGO:0044829 positive regulation by host of viral genome replication IEA
 biological_processGO:0048524 positive regulation of viral process IEA
 biological_processGO:0051260 protein homooligomerization IEA
 biological_processGO:0090314 positive regulation of protein targeting to membrane IEA
 biological_processGO:1901585 regulation of acid-sensing ion channel activity IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005739 mitochondrion IEA
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0005856 cytoskeleton IEA
 cellular_componentGO:0005887 integral component of plasma membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0045121 membrane raft IEA
 cellular_componentGO:0048471 perinuclear region of cytoplasm IEA
 molecular_functionGO:0042802 identical protein binding IEA
 molecular_functionGO:0042803 protein homodimerization activity IEA
 molecular_functionGO:0070063 RNA polymerase binding IEA


Pathways (from Reactome)
Pathway description
Stimuli-sensing channels
Neutrophil degranulation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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