ENSGALG00000004163


Gallus gallus

Features
Gene ID: ENSGALG00000004163
  
Biological name :NPHS2
  
Synonyms : NPHS2 / NPHS2, podocin
  
Possible biological names infered from orthology : Podocin / Q91X05 / Q9NP85
  
Species: Gallus gallus
  
Chr. number: 8
Strand: 1
Band:
Gene start: 6149043
Gene end: 6155430
  
Corresponding Affymetrix probe sets: GgaAffx.2579.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000006610
NCBI entrez gene - 424422     See in Manteia.
RefSeq - XM_422265
swissprot - F1P2B2
Ensembl - ENSGALG00000004163
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 nphs2ENSDARG00000042850Danio rerio
 NPHS2ENSG00000116218Homo sapiens
 Nphs2ENSMUSG00000026602Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
STOM / stomatin / P27105* / P54116* / Erythrocyte band 7 integral membrane protein *ENSGALG0000000143432
STOML3 / stomatin like 3 / Q6PE84* / Q8TAV4* / stomatin (Epb7.2)-like 3*ENSGALG0000001703931
STOML1 / stomatin like 1 / Q9UBI4*ENSGALG0000000147020
Q99JB2* / Q9UJZ1* / STOML2* / stomatin like 2* / Stomatin-like protein 2, mitochondrial *ENSGALG0000000206415


Protein motifs (from Interpro)
Interpro ID Name
 IPR001107  Band 7 domain
 IPR001972  Stomatin family
 IPR028509  Podocin


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007588 excretion IEA
 biological_processGO:0031532 actin cytoskeleton reorganization IEA
 biological_processGO:0072249 metanephric glomerular visceral epithelial cell development IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0005887 integral component of plasma membrane IEA
 cellular_componentGO:0005911 cell-cell junction IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0031235 intrinsic component of the cytoplasmic side of the plasma membrane IEA
 cellular_componentGO:0032991 protein-containing complex IEA
 cellular_componentGO:0036057 slit diaphragm IEA
 cellular_componentGO:0045121 membrane raft IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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