ENSMUSG00000027744


Mus musculus

Features
Gene ID: ENSMUSG00000027744
  
Biological name :Stoml3
  
Synonyms : Q6PE84 / stomatin (Epb7.2)-like 3 / Stoml3
  
Possible biological names infered from orthology : Q8TAV4 / stomatin like 3
  
Species: Mus musculus
  
Chr. number: 3
Strand: 1
Band: C
Gene start: 53488653
Gene end: 53508502
  
Corresponding Affymetrix probe sets: 10491993 (MoGene1.0st)   1441036_at (Mouse Genome 430 2.0 Array)   1447847_x_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000029307
NCBI entrez gene - 229277     See in Manteia.
MGI - MGI:2388072
RefSeq - NM_153156
RefSeq Peptide - NP_694796
swissprot - B2RS16
swissprot - Q6PE84
Ensembl - ENSMUSG00000027744
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 stoml3aENSDARG00000079914Danio rerio
 stoml3bENSDARG00000057035Danio rerio
 STOML3ENSGALG00000017039Gallus gallus
 Q8TAV4ENSG00000133115Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Stom / P54116 / Erythrocyte band 7 integral membrane protein / P27105* / stomatin*ENSMUSG0000002688062
Nphs2 / Q91X05 / Podocin / Q9NP85* / NPHS2, podocin*ENSMUSG0000002660243
Stoml1 / stomatin like 1 / Q9UBI4*ENSMUSG0000003233330
Q99JB2 / Stoml2 / Stomatin-like protein 2, mitochondrial / Q9UJZ1* / stomatin like 2*ENSMUSG0000002845528


Protein motifs (from Interpro)
Interpro ID Name
 IPR001107  Band 7 domain
 IPR001972  Stomatin family
 IPR018080  Band 7/stomatin-like, conserved site
 IPR028519  Stomatin-like protein 3
 IPR036013  Band 7/SPFH domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007165 signal transduction IDA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0005929 cilium IDA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0045121 membrane raft IDA
 molecular_functionGO:0005515 protein binding IPI


Pathways (from Reactome)
Pathway description
Stimuli-sensing channels


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0002734 abnormal mechanical nociception "abnormal capability to sense pain elicited by mechanical stimulation" [pvb:Pierre Vanden Borre , Mouse Genome Informatics Curator]
Show

Allelic Composition: Vcptm1Dts/Vcptm1Dts
Genetic Background: involves: 129P2/OlaHsd * C57BL/6

 MP:0003477 abnormal nerve fiber response "anomaly in the electrophysiological recordings from a single or several nerve fiber(s)" [Nmice:Neuromice Consortium Submission]
Show

Allelic Composition: Vcptm1Dts/Vcptm1Dts
Genetic Background: involves: 129P2/OlaHsd * C57BL/6

 MP:0005498 hyporesponsive to tactile stimuli "reduced reflex action normally induced by touch or pain" [cwg:Carroll-Ann W. Goldsmith , Mouse Genome Informatics curator]
Show

Allelic Composition: Vcptm1Dts/Vcptm1Dts
Genetic Background: involves: 129P2/OlaHsd * C57BL/6

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSMUSG00000028008 Asic5 / Q9R0Y1 / Acid-sensing ion channel 5 / Q9NY37* / acid sensing ion channel subunit family member 5*  / complex / reaction
 ENSMUSG00000023017 Asic1 / Q6NXK8 / Acid-sensing ion channel 1 / P78348* / acid sensing ion channel subunit 1*  / complex / reaction
 ENSMUSG00000038276 Asic3 / Q6X1Y6 / Acid-sensing ion channel 3 / Q9UHC3* / acid sensing ion channel subunit 3*  / complex / reaction
 ENSMUSG00000020704 Asic2 / Q925H0 / Acid-sensing ion channel 2 / Q16515* / acid sensing ion channel subunit 2*  / complex / reaction






 

1 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr