ENSDARG00000016350


Danio rerio

Features
Gene ID: ENSDARG00000016350
  
Biological name :cap1
  
Synonyms : cap1 / CAP, adenylate cyclase-associated protein 1 (yeast)
  
Possible biological names infered from orthology : cyclase associated actin cytoskeleton regulatory protein 1 / Mus musculus CAP, adenylate cyclase-associated protein 1 (yeast) (Cap1), transcript variant 3, mRNA. / P40124 / Q01518
  
Species: Danio rerio
  
Chr. number: 19
Strand: 1
Band:
Gene start: 43715911
Gene end: 43737071
  
Corresponding Affymetrix probe sets: Dr.6923.1.S1_at (Zebrafish Array)   NM_199909_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000117365
Ensembl peptide - ENSDARP00000020578
NCBI entrez gene - 334527     See in Manteia.
RefSeq - NM_199909
RefSeq Peptide - NP_956203
swissprot - B8JMD0
swissprot - Q6YBS2
ZFIN ID - ZDB-GENE-030131-6459
Ensembl - ENSDARG00000016350
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CAP1ENSGALG00000036294Gallus gallus
 CAP1ENSG00000131236Homo sapiens
 Cap1ENSMUSG00000028656Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
cap2 / CAP, adenylate cyclase-associated protein, 2 (yeast) / Q9CYT6* / P40123* / Adenylyl cyclase-associated protein 2 * / cyclase associated actin cytoskeleton regulatory protein 2*ENSDARG0000010447859


Protein motifs (from Interpro)
Interpro ID Name
 IPR001837  Adenylate cyclase-associated CAP
 IPR006599  CARP motif
 IPR013912  Adenylate cyclase-associated CAP, C-terminal
 IPR013992  Adenylate cyclase-associated CAP, N-terminal
 IPR017901  C-CAP/cofactor C-like domain
 IPR018106  CAP, conserved site, N-terminal
 IPR028415  Adenylyl cyclase-associated protein CAP1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000902 cell morphogenesis IBA
 biological_processGO:0001756 somitogenesis IMP
 biological_processGO:0007010 cytoskeleton organization IEA
 biological_processGO:0007163 establishment or maintenance of cell polarity IBA
 biological_processGO:0007165 signal transduction IBA
 biological_processGO:0007190 activation of adenylate cyclase activity ISS
 biological_processGO:0008078 mesodermal cell migration IMP
 biological_processGO:0008154 actin polymerization or depolymerization IBA
 biological_processGO:0030036 actin cytoskeleton organization IEA
 biological_processGO:0045761 regulation of adenylate cyclase activity IBA
 cellular_componentGO:0030864 cortical actin cytoskeleton IBA
 molecular_functionGO:0003779 actin binding IBA
 molecular_functionGO:0008179 adenylate cyclase binding IBA


Pathways (from Reactome)
Pathway description
Neutrophil degranulation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000003 adaxial cell adaxial cell disorganized , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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