ENSDARG00000016448


Danio rerio

Features
Gene ID: ENSDARG00000016448
  
Biological name :vtg3
  
Synonyms : vitellogenin 3, phosvitinless / vtg3
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 11
Strand: -1
Band:
Gene start: 7359496
Gene end: 7380688
  
Corresponding Affymetrix probe sets: Dr.2978.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000094194
Ensembl peptide - ENSDARP00000023158
NCBI entrez gene - 30518     See in Manteia.
RefSeq - NM_131265
RefSeq Peptide - NP_571340
swissprot - F1QQQ3
swissprot - F1QPC0
ZFIN ID - ZDB-GENE-991019-2
Ensembl - ENSDARG00000016448
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 VTG1ENSGALG00000039354Gallus gallus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
vtg6 / vitellogenin 6ENSDARG0000001682528
vtg7 / vitellogenin 7ENSDARG0000009241928
vtg1 / vitellogenin 1ENSDARG0000009223328
vtg4 / vitellogenin 4ENSDARG0000007842927
vtg2 / vitellogenin 2ENSDARG0000005580927
vtg5 / vitellogenin 5ENSDARG0000009212627
si:dkey-4c23.3ENSDARG0000009202825


Protein motifs (from Interpro)
Interpro ID Name
 IPR001747  Lipid transport protein, N-terminal
 IPR011030  Lipovitellin-phosvitin complex, superhelical domain
 IPR015255  Vitellinogen, open beta-sheet
 IPR015258  Vitellinogen, beta-sheet shell
 IPR015816  Vitellinogen, beta-sheet N-terminal
 IPR015817  Vitellinogen, open beta-sheet, subdomain 1
 IPR015819  Lipid transport protein, beta-sheet shell


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006869 lipid transport IEA
 biological_processGO:0071391 cellular response to estrogen stimulus IDA
 molecular_functionGO:0005319 lipid transporter activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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