ENSDARG00000078429


Danio rerio

Features
Gene ID: ENSDARG00000078429
  
Biological name :vtg4
  
Synonyms : vitellogenin 4 / vtg4
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 22
Strand: -1
Band:
Gene start: 24784013
Gene end: 24791505
  
Corresponding Affymetrix probe sets: Dr.25009.6.A1_at (Zebrafish Array)   Dr.25009.6.A1_a_at (Zebrafish Array)   NM_001045294_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000115012
NCBI entrez gene - 678536     See in Manteia.
RefSeq - NM_001045294
RefSeq Peptide - NP_001038759
swissprot - F1Q7L0
ZFIN ID - ZDB-GENE-001201-3
Ensembl - ENSDARG00000078429
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
vtg6 / vitellogenin 6ENSDARG0000001682594
vtg5 / vitellogenin 5ENSDARG0000009212694
vtg1 / vitellogenin 1ENSDARG0000009223393
vtg7 / vitellogenin 7ENSDARG0000009241990
vtg2 / vitellogenin 2ENSDARG0000005580977
si:dkey-4c23.3ENSDARG0000009202847
vtg3 / vitellogenin 3, phosvitinlessENSDARG0000001644825


Protein motifs (from Interpro)
Interpro ID Name
 IPR001747  Lipid transport protein, N-terminal
 IPR011030  Lipovitellin-phosvitin complex, superhelical domain
 IPR015255  Vitellinogen, open beta-sheet
 IPR015258  Vitellinogen, beta-sheet shell
 IPR015816  Vitellinogen, beta-sheet N-terminal
 IPR015817  Vitellinogen, open beta-sheet, subdomain 1
 IPR015819  Lipid transport protein, beta-sheet shell


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006869 lipid transport IEA
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0005319 lipid transporter activity IEA
 molecular_functionGO:0005515 protein binding IPI


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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