ENSDARG00000092233


Danio rerio

Features
Gene ID: ENSDARG00000092233
  
Biological name :vtg1
  
Synonyms : vitellogenin 1 / vtg1
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 22
Strand: -1
Band:
Gene start: 24730965
Gene end: 24738188
  
Corresponding Affymetrix probe sets: Dr.25009.1.S1_a_at (Zebrafish Array)   Dr.25009.6.A1_a_at (Zebrafish Array)   NM_001044897_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000050237
NCBI entrez gene - 559475     See in Manteia.
RefSeq - NM_001044897
RefSeq Peptide - NP_001038362
swissprot - Q1LWN2
ZFIN ID - ZDB-GENE-001201-1
Ensembl - ENSDARG00000092233
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
vtg6 / vitellogenin 6ENSDARG0000001682593
vtg4 / vitellogenin 4ENSDARG0000007842993
vtg5 / vitellogenin 5ENSDARG0000009212693
vtg7 / vitellogenin 7ENSDARG0000009241992
vtg2 / vitellogenin 2ENSDARG0000005580978
si:dkey-4c23.3ENSDARG0000009202848
vtg3 / vitellogenin 3, phosvitinlessENSDARG0000001644826


Protein motifs (from Interpro)
Interpro ID Name
 IPR001747  Lipid transport protein, N-terminal
 IPR011030  Lipovitellin-phosvitin complex, superhelical domain
 IPR015255  Vitellinogen, open beta-sheet
 IPR015258  Vitellinogen, beta-sheet shell
 IPR015816  Vitellinogen, beta-sheet N-terminal
 IPR015817  Vitellinogen, open beta-sheet, subdomain 1
 IPR015819  Lipid transport protein, beta-sheet shell


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006869 lipid transport IEA
 biological_processGO:0009410 response to xenobiotic stimulus IDA
 biological_processGO:0032355 response to estradiol IDA
 biological_processGO:0071391 cellular response to estrogen stimulus IDA
 biological_processGO:0098869 cellular oxidant detoxification IEA
 molecular_functionGO:0005319 lipid transporter activity IEA
 molecular_functionGO:0016209 antioxidant activity IDA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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