ENSDARG00000016490


Danio rerio

Features
Gene ID: ENSDARG00000016490
  
Biological name :rab11fip3
  
Synonyms : Q7T005 / RAB11 family interacting protein 3 (class II) / rab11fip3
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 24
Strand: 1
Band:
Gene start: 37722048
Gene end: 37794593
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000120017
Ensembl peptide - ENSDARP00000149009
NCBI entrez gene - 573631     See in Manteia.
RefSeq - NM_001328521
RefSeq Peptide - NP_001315450
swissprot - Q7T005
ZFIN ID - ZDB-GENE-040724-138
Ensembl - ENSDARG00000016490
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q3LGD4 / rab11fip4a / RAB11 family interacting protein 4 (class II) a / Q8BQP8* / Q86YS3* / RAB11FIP4* / RAB11 family interacting protein 4*ENSDARG0000009017012
B3DGU2 / rab11fip4b / RAB11 family interacting protein 4 (class II) b / Q8BQP8* / Q86YS3* / RAB11FIP4* / RAB11 family interacting protein 4*ENSDARG0000010320710


Protein motifs (from Interpro)
Interpro ID Name
 IPR002048  EF-hand domain
 IPR011992  EF-hand domain pair
 IPR019018  Rab-binding domain FIP-RBD
 IPR032920  Rab11 family-interacting protein 3


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000910 cytokinesis IEA
 biological_processGO:0007049 cell cycle IEA
 biological_processGO:0016192 vesicle-mediated transport IEA
 biological_processGO:0032456 endocytic recycling ISS
 biological_processGO:0032465 regulation of cytokinesis ISS
 biological_processGO:0051301 cell division IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005768 endosome ISS
 cellular_componentGO:0005813 centrosome ISS
 cellular_componentGO:0005815 microtubule organizing center IEA
 cellular_componentGO:0005856 cytoskeleton IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0030496 midbody ISS
 cellular_componentGO:0032154 cleavage furrow ISS
 cellular_componentGO:0055037 recycling endosome ISS
 cellular_componentGO:0055038 recycling endosome membrane IEA
 molecular_functionGO:0005509 calcium ion binding IEA
 molecular_functionGO:0017137 Rab GTPase binding ISS
 molecular_functionGO:0030306 ADP-ribosylation factor binding ISS
 molecular_functionGO:0042803 protein homodimerization activity ISS
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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