ENSDARG00000103207


Danio rerio

Features
Gene ID: ENSDARG00000103207
  
Biological name :rab11fip4b
  
Synonyms : B3DGU2 / RAB11 family interacting protein 4 (class II) b / rab11fip4b
  
Possible biological names infered from orthology : Q86YS3 / Q8BQP8 / RAB11 family interacting protein 4 / RAB11FIP4
  
Species: Danio rerio
  
Chr. number: 6
Strand: 1
Band:
Gene start: 18418651
Gene end: 18440636
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000135008
Ensembl peptide - ENSDARP00000139004
Ensembl peptide - ENSDARP00000132572
NCBI entrez gene - 100151129     See in Manteia.
RefSeq - NM_001128825
RefSeq Peptide - NP_001122297
swissprot - B3DGU2
ZFIN ID - ZDB-GENE-080722-8
Ensembl - ENSDARG00000103207
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 RAB11FIP4ENSGALG00000003227Gallus gallus
 Q86YS3ENSG00000131242Homo sapiens
 Q8BQP8ENSMUSG00000017639Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q3LGD4 / rab11fip4a / RAB11 family interacting protein 4 (class II) a / Q8BQP8* / Q86YS3* / RAB11FIP4* / RAB11 family interacting protein 4*ENSDARG0000009017068
Q7T005 / rab11fip3 / RAB11 family interacting protein 3 (class II)ENSDARG0000001649036


Protein motifs (from Interpro)
Interpro ID Name
 IPR019018  Rab-binding domain FIP-RBD


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007049 cell cycle IEA
 biological_processGO:0032465 regulation of cytokinesis ISS
 biological_processGO:0051301 cell division IEA
 cellular_componentGO:0005768 endosome ISS
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0030139 endocytic vesicle ISS
 cellular_componentGO:0030496 midbody ISS
 cellular_componentGO:0031410 cytoplasmic vesicle IEA
 cellular_componentGO:0032154 cleavage furrow ISS
 cellular_componentGO:0055038 recycling endosome membrane ISS
 molecular_functionGO:0017137 Rab GTPase binding ISS
 molecular_functionGO:0030306 ADP-ribosylation factor binding ISS
 molecular_functionGO:0042803 protein homodimerization activity ISS


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr